Halomonas sp. A020: HaloA020_24570
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Entry
HaloA020_24570 CDS
T10931
Symbol
fadD-1
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
haaz Halomonas sp. A020
Pathway
haaz00061
Fatty acid biosynthesis
haaz00071
Fatty acid degradation
haaz01100
Metabolic pathways
haaz01212
Fatty acid metabolism
haaz02024
Quorum sensing
haaz04146
Peroxisome
Module
haaz_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
haaz00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
HaloA020_24570 (fadD-1)
00071 Fatty acid degradation
HaloA020_24570 (fadD-1)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
HaloA020_24570 (fadD-1)
09145 Cellular community - prokaryotes
02024 Quorum sensing
HaloA020_24570 (fadD-1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
haaz01004
]
HaloA020_24570 (fadD-1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
haaz04147
]
HaloA020_24570 (fadD-1)
Enzymes [BR:
haaz01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
HaloA020_24570 (fadD-1)
Lipid biosynthesis proteins [BR:
haaz01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
HaloA020_24570 (fadD-1)
Exosome [BR:
haaz04147
]
Exosomal proteins
Exosomal proteins of breast milk
HaloA020_24570 (fadD-1)
Exosomal proteins of breast cancer cells
HaloA020_24570 (fadD-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
BCB61756
LinkDB
All DBs
Position
2657296..2658969
Genome browser
AA seq
557 aa
AA seq
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MSEHANTSILSGPALEGLEDYHSITDVFHSAVSRFSSKPAFTCMGKTLSFSDLDRLSAHF
AAWLQHETDLVPGDRIAIQLPNVLQFPVAVFGALRAGLVVVNTNPLYTEREMAHQFKDSN
AKAIVILANMADKLEKVLDKTDIKHVLVTQLADLHDAPKRWLINAVVKHVKKMVPAYSLP
SAVGFRDALKKGASLKHTPVERTLEDLAALQYTGGTTGMPKGAMLTHRNLVANMLQARSA
IGEHLTDGEELVIAPLPVYHIYTFTVNCLFLMETGNHSLLITNPRDLPNFVKELKGLPFT
GFIGLNTLFNALCNRDDFKQLDFSKLKLTISGGMALTKAAAQRWEETTGCPIAEGYGLTE
TSPIVSFNPNDAIQLGTIGKPVAGTSVKVVDGDGQDMPFGEPGELCVKGPQVMKGYWQRE
EETRNAIDDDGWFRTGDIAVLQSDGYIKIVDRKKDMILVSGFNVYPNEVEDVVAAHPDVL
EAAAVGVADENAGEAIKLFVVSKNSQLDAETLRAWCKKELTAYKVPKYIEFRDELPKTNV
GKVLRRQLRDQEKPSTP
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaacacgccaacacctctattttaagcggaccagcgcttgaagggttggaagac
taccactctattacggatgtttttcactcagccgtctcacgtttttcaagcaagcccgcg
tttacctgcatgggcaaaacgctgagtttttccgaccttgaccgtctttcggctcacttc
gcggcttggcttcagcatgagaccgacttggtgccaggagacaggatcgccatccagttg
ccgaacgtgcttcagttccccgtggcagtgtttggtgccttgcgggcggggctcgtggtg
gtcaacaccaacccgctgtataccgagcgggagatggcgcaccagttcaaagactccaat
gccaaggccatcgtgatcttggccaatatggccgacaagctagaaaaagtgctcgataaa
acggacattaagcatgtattggtaacgcagcttgccgacctgcacgatgcccccaagcgt
tggctcatcaatgccgtcgtgaagcacgtcaagaaaatggtgcctgcctactcgctgccc
agcgccgttggctttagagacgcactgaagaaaggcgcgtcgctaaagcacacccccgtg
gagcgcacgttggaggatttggcagcgctgcagtacacgggcggcacgaccggtatgcct
aaaggggccatgctgacccatcgcaatctggtggcgaacatgctacaggcccgttcagcc
atcggtgaacatctcaccgatggtgaagagctggtgattgcgccgttgcctgtctaccac
atctacacctttaccgtgaactgcttgttcctgatggaaaccggcaatcactcgctgctc
atcaccaatcctcgagatttgcccaatttcgttaaagaactcaaagggctgccgtttacc
ggttttatcggcctcaatacgctatttaatgcgctatgtaatcgtgatgacttcaaacag
ctcgacttctccaaattgaaactgaccatttccggcggcatggcgctgaccaaggcggct
gctcagcgctgggaagagaccaccggttgcccgatcgccgaaggctacggccttaccgag
acgtcgcctatcgtcagcttcaaccccaacgatgccattcaattgggcaccattggcaaa
ccggtcgcgggtacgtcggtgaaagtggtggatggcgatggccaagatatgccgtttgga
gagccaggggagctgtgtgtgaagggccctcaggtcatgaaaggttattggcagcgtgaa
gaggaaacgcgtaacgccatcgatgatgacggctggttccggacaggagatatcgctgta
ttacagagcgacggctacatcaaaatcgtggatcgtaagaaggacatgattttggtgtcg
ggtttcaacgtctaccccaatgaggtcgaggacgtcgtcgcagcacatccagatgtgttg
gaagcagcggccgtgggcgtcgccgatgagaacgcgggtgaggccatcaagctattcgtg
gtgtcgaaaaacagccagctcgatgccgagacgttacgggcttggtgcaagaaagagcta
actgcgtacaaagtgcccaaatacatcgagttccgcgatgagctaccgaagaccaacgtt
ggcaaggtgctgcggcgccaactgcgtgatcaggaaaagccttctacgccataa
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