Halomonas sp. A020: HaloA020_31520
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Entry
HaloA020_31520 CDS
T10931
Symbol
fis
Name
(GenBank) DNA-binding protein Fis
KO
K03557
Fis family transcriptional regulator, factor for inversion stimulation protein
Organism
haaz Halomonas sp. A020
Brite
KEGG Orthology (KO) [BR:
haaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
haaz03000
]
HaloA020_31520 (fis)
03036 Chromosome and associated proteins [BR:
haaz03036
]
HaloA020_31520 (fis)
03400 DNA repair and recombination proteins [BR:
haaz03400
]
HaloA020_31520 (fis)
Transcription factors [BR:
haaz03000
]
Prokaryotic type
Helix-turn-helix
Other families
HaloA020_31520 (fis)
Chromosome and associated proteins [BR:
haaz03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
HaloA020_31520 (fis)
DNA repair and recombination proteins [BR:
haaz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
HaloA020_31520 (fis)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_8
Fis_N
HTH_30
Xre-like-HTH
DUF7523
Phage_NinH
Motif
Other DBs
NCBI-ProteinID:
BCB62451
LinkDB
All DBs
Position
3387246..3387569
Genome browser
AA seq
107 aa
AA seq
DB search
MTERDLLSSERSSRLSGTLAAPSASAQPQPLREAVETAMRRYFEHLDGSQTSDLYAMVMA
EVEAPLLACVMEHTDGNQTRAADVLGLNRGTLRKKLKQYGLIESDAP
NT seq
324 nt
NT seq
+upstream
nt +downstream
nt
atgactgaacgcgacctgctctccagcgaacgctcctcacgactctcaggcacgctagca
gccccctccgccagcgcacagccacagccactgagagaagcggtagagaccgccatgcgc
cgttacttcgagcatctcgatggcagccaaacatctgacttatatgccatggtgatggcc
gaagtagaggccccactgttagcgtgcgtgatggagcataccgacggtaatcaaactcgc
gccgccgacgtacttggcctgaaccgtggcacgctacgcaaaaaactcaagcagtatgga
ttgattgaaagtgacgccccttga
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