Halomonas sp. A020: HaloA020_31640
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Entry
HaloA020_31640 CDS
T10931
Symbol
groL
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
haaz Halomonas sp. A020
Pathway
haaz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
haaz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HaloA020_31640 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
haaz03019
]
HaloA020_31640 (groL)
03110 Chaperones and folding catalysts [BR:
haaz03110
]
HaloA020_31640 (groL)
03029 Mitochondrial biogenesis [BR:
haaz03029
]
HaloA020_31640 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
haaz04147
]
HaloA020_31640 (groL)
Enzymes [BR:
haaz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
HaloA020_31640 (groL)
Messenger RNA biogenesis [BR:
haaz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
HaloA020_31640 (groL)
Chaperones and folding catalysts [BR:
haaz03110
]
Heat shock proteins
HSP60 / Chaperonin
HaloA020_31640 (groL)
Mitochondrial biogenesis [BR:
haaz03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
HaloA020_31640 (groL)
Exosome [BR:
haaz04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
HaloA020_31640 (groL)
Exosomal proteins of other body fluids (saliva and urine)
HaloA020_31640 (groL)
Exosomal proteins of breast cancer cells
HaloA020_31640 (groL)
Exosomal proteins of colorectal cancer cells
HaloA020_31640 (groL)
Exosomal proteins of bladder cancer cells
HaloA020_31640 (groL)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
NNH2
Motif
Other DBs
NCBI-ProteinID:
BCB62463
LinkDB
All DBs
Position
3398164..3399807
Genome browser
AA seq
547 aa
AA seq
DB search
MAAKQVKFSDDARKRMARGVDVLANAVKVTLGPKGRNVVLDKSFGAPTVTKDGVSVAKEI
ELKDKFENMGAQMVKEVASKTSDAAGDGTTTATVLAQAIVAEGLKGVTAGMNPMDLKRGI
DQAVTAAVKEIQAMSVPCTDTKSIAQVGTISANGDKRIGEIIAEAMEKVGKEGVITVDEG
RGFEDELEVVEGMQFDRGYLSPYFVTNQDTMTVELEDPYILLVDKKISNIRELLPVLEAV
AKQGKPLAIIAEDIEGEALATLVVNNMRGIVKVAAAKAPGFGDRRKAMLQDIAILTNGTV
ISEEVGLTLEQANLDHLGTAKRMTMSKENTTIIDGAGAEDDIEARVNQIRAQIEETSSDY
DKEKLQERVAKLAGGVAVIRVGAATEVEMKEKKARVEDALHSTRAAVEEGVVPGGGTALV
RVMAKVQGLTGDNEDQNHGINMALRAMQAPLRQIVTNAGEEAAVVINRVKDGEGNFGYNA
QTSEYGDLFEMGVLDPAKVTRTALQSAGSVAGLMITTECMIADDPEEKEAAPDMGGMGGM
GGMGGMM
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaagcaagttaagttctccgatgatgctcgcaaacgcatggcacgtggtgtc
gacgtcctggcgaacgccgttaaagtcacgctgggcccgaaaggccgcaacgtggttttg
gacaaatccttcggcgcgccgaccgtcactaaagacggtgtctctgtcgcaaaagagatc
gaactgaaagacaagttcgagaacatgggcgcccagatggtgaaagaagtcgcttccaag
acttccgacgccgccggtgacggtaccaccacggccaccgttctggcacaggccatcgta
gcggaaggcttgaaaggcgtgaccgcgggcatgaacccgatggatttgaaacgcggtatc
gaccaagccgtgaccgcagcggtcaaagagattcaggcgatgtccgtgccctgcaccgac
accaagtccattgcgcaagtaggcacgatctctgccaacggcgacaagcgcattggcgaa
atcatcgccgaagcgatggaaaaagtcggtaaagaaggcgtcatcaccgttgatgaaggt
cgcggctttgaagacgagcttgaagtggttgaaggcatgcagttcgaccgcggctacctc
tcgccctacttcgtcaccaaccaagacaccatgaccgtcgagttggaagatccgtacatc
ctgctcgttgacaagaagatctccaacattcgcgaactactgccggtgctggaagccgtt
gccaagcaaggcaagccgctggccatcatcgctgaagatatcgaaggcgaagcgcttgcg
acgctggtcgtgaacaacatgcgcggtatcgtgaaagttgcggctgccaaagcacctggc
ttcggcgaccgtcgcaaagcgatgctgcaggatatcgctatcctgaccaacggcaccgtg
atctccgaagaagtaggtctgacccttgagcaggcaaacctggatcacctgggtactgcc
aagcgcatgaccatgtctaaagagaacaccaccatcatcgatggcgcaggtgctgaagac
gacatcgaagcgcgcgttaatcaaatccgcgcgcaaatcgaagaaacctcttctgactac
gacaaagagaagctgcaagagcgcgttgccaagctggcaggcggcgttgccgtcattcgc
gtcggtgcagcaacagaagttgaaatgaaagagaagaaagcccgtgttgaagatgctctg
cactcaactcgcgctgccgtagaagaaggcgtcgtacctggtggcggtactgccctggta
cgcgtgatggccaaagtacaaggcctgaccggtgacaacgaagaccagaaccacggtatc
aacatggcgcttcgtgccatgcaggcaccgctgcgtcagatcgtcaccaacgcgggcgaa
gaagctgctgtggtcatcaaccgcgtgaaagatggtgaaggcaacttcggttacaacgcg
caaaccagcgagtacggcgacctgttcgaaatgggtgttctcgacccggcaaaagtaacc
cgcactgcgttgcagtctgctggttccgttgctggcctgatgatcaccaccgagtgcatg
atcgccgacgacccggaagagaaagaagctgccccggatatgggtggcatgggcggaatg
ggtggcatgggcggcatgatgtaa
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