Halomonas sp. A020: HaloA020_32820
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Entry
HaloA020_32820 CDS
T10931
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
haaz Halomonas sp. A020
Pathway
haaz03018
RNA degradation
Brite
Enzymes [BR:
haaz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HaloA020_32820 (rhlB)
Messenger RNA biogenesis [BR:
haaz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HaloA020_32820 (rhlB)
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GFIT
Other DBs
NCBI-ProteinID:
BCB62581
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Position
complement(3531105..3532379)
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AA seq
424 aa
AA seq
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MSESEQTTASAQNRKPKRRRRKPRRRQSNWDLRQFQVPAVAGKWRFHDFDLPLPLMRAIH
AQGFEYCTPIQAEALRHTLLGGDIVGKAQTGTGKTAAFLISVLAYFLEEPTPEGQKPGAP
RALIIAPTRELALQIEKDAKALARFTQLNVASVVGGMDYQKQRDSLSKKIDILVATPGRL
LDFHQKRDIDLSETEVLVLDEADRMLSMGFIPDVKRIIRYTPKKEERQTFLFSATFTDDI
LNLASQWTLDPAHVEIEVTVENQADIDQRVYLVSDDDKQRLLVKLLEQESFERVMVFGNR
RDLVRKLDDLLKKAGVSAAMLSGDVPQNQRIKTLESFREGDVQVLVATDVAGRGIHIEDV
SHVINYTLPEDPEDYVHRIGRTGRAGAKGVSISFVGEEDAFSLPEIERYINGKLPCEHPP
EGML
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagtcggaacagaccacagcatcggcccagaaccgcaagccaaaacgtcgtcgt
cgtaaaccgcgtcgtcgtcagtcgaactgggatcttcgtcagtttcaggtgcccgccgtt
gccggcaagtggcgcttccatgactttgatctgccgctgcctttgatgcgtgcgattcac
gcccaagggttcgagtactgcacgcctatccaagcggaagcactgcgccatacgctgttg
ggaggcgacatcgtcggtaaagcgcagacgggaaccggtaaaaccgccgcctttttgatc
tccgtgttggcctattttctcgaagagcccacaccggagggccaaaagccgggggctccc
cgcgcgctgatcatcgcgccgacccgtgagctggcgctgcaaatcgagaaagacgccaag
gcgcttgcgcgctttactcagcttaatgtcgccagtgtcgtcggcggcatggattatcaa
aaacagcgcgatagcctgagcaagaagatcgatatcctggtcgccacgcctgggcgcctg
cttgattttcatcagaagcgtgatatcgacctctctgaaaccgaagtgctggtgctcgac
gaagcagatcgtatgctctccatggggttcatccccgacgtgaagcggatcattcgctac
acgccaaaaaaagaggagcgccagacgttcctgttctcggccaccttcaccgacgatatt
ctcaatctggcgagtcagtggacgctcgatccggcgcatgtcgaaatcgaagtgaccgtt
gaaaatcaggcggatatcgatcagcgggtctatctcgtctccgatgacgacaagcaacgc
ctgctggtcaagctactggagcaggagagcttcgagcgcgttatggtgttcggaaaccgc
cgcgatctcgtgcgtaagttggatgacctgctgaaaaaagccggtgtcagtgcggccatg
ctatcgggtgatgtgccgcagaatcagcgcatcaagacgctggaaagcttccgcgaaggg
gacgtgcaggtgctggtggccaccgacgtggccggccgcggaattcatatcgaagacgtg
agccacgtgatcaactataccttgccagaagacccggaagattacgttcatcgtatcgga
cgtaccggccgtgccggggcgaaaggggtgtcgatcagcttcgtcggcgaagaggacgct
ttctcgttgcctgaaatcgagcgctatatcaacggtaagttgccctgcgaacacccgccg
gaaggcatgctgtaa
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