Halomonas sp. A020: HaloA020_33040
Help
Entry
HaloA020_33040 CDS
T10931
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
haaz Halomonas sp. A020
Pathway
haaz03420
Nucleotide excision repair
haaz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
haaz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HaloA020_33040
03430 Mismatch repair
HaloA020_33040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
haaz03400
]
HaloA020_33040
Enzymes [BR:
haaz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HaloA020_33040
DNA repair and recombination proteins [BR:
haaz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HaloA020_33040
MMR (mismatch excision repair)
Other MMR factors
HaloA020_33040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
AAA_12
ResIII
Motif
Other DBs
NCBI-ProteinID:
BCB62603
LinkDB
All DBs
Position
complement(3552337..3554535)
Genome browser
AA seq
732 aa
AA seq
DB search
MKLTAEQQAVVHHGEGHARVAAVAGAGKTTTMAARVLHLLSSGVAPKRMLVLMFNRSAKE
DFQRRLATMAPDGQPLPDVRTFHSLGHRLTQSLCRWGALAPRRLLSAEWQMERLLRQASL
NVLADQMERRDAALEGDRLEALAHFCGLVKAEMLSAETLYERLQFEPDTDYFPAAFAEAE
RLLEAEGVMSYADLLYRPVEALEADDALRQRVEGFLDHVIVDEYQDINTVQQRLLAVLAG
STASVMAVGDANQCIYEWRGARPDTMLENFTATFGDATDYPLSMTFRHGHALALTANHAI
MANRRRPDQLCLAGARNPATRINAGQGSRFLLDALIDWQSQGRALSDASLLVRSWALSVP
FQLALLQAGIPFRMLREDRFVFRLPLVQALAGYLKLSRRPELLQDPEQLLLLLAQPTPFV
ARERLQRLAYQLASTQQWPERHEPVLAALKPLQRRTLKKRWELLCELPRLSAWPPAKLLS
HVVEVIDAEKTLKRAAARRDKGEEDVRLLDVLIEQAESVQDPDAFIELLERPVENQAGGV
LISTVHGAKGLEWPLVAVAGVNEEDFPYYSHDNPLSDERLEEERRLFYVAITRAKEQLLV
LHDGGVHKPSRFIAESAWQDGMRIAEHLAHAQPPSDPVAVNAPSLVERYLKKIGREDIAL
AAPQVNETVAGYRVHSHFYPGQRLLHAVFGEGEVAAVEGNPSDPVIDVRFVQAGRRRLIA
RRAPIEIMESAS
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
gtgaagctaacggccgaacagcaagcagtggttcaccatggcgaagggcatgctcgtgtt
gccgccgtggcgggagcgggtaagaccacgaccatggccgctcgagtacttcatctgcta
tcgagcggcgttgctcccaagcgaatgctggtgctgatgttcaatcgttctgctaaagag
gatttccagcggcgcctggccaccatggccccagatgggcaaccgctgcccgatgtgcgc
acgtttcactctctggggcatcgtctgacgcaaagcttgtgccgttggggggcgctggcc
cctagacggttactctctgccgagtggcagatggagcgcttgctgcgtcaggctagtttg
aacgtgctggccgaccaaatggagcgccgtgacgctgcgctagagggcgaccgcctggaa
gcactggcgcatttttgcgggttggtaaaggcggaaatgctatctgccgagaccctctac
gagcggcttcagttcgagcctgacaccgattactttcctgctgccttcgccgaggccgaa
cgccttttggaggcggaaggagtgatgagctatgcggatctgctctaccgtcccgtagag
gccctggaagccgatgacgcacttcgccagcgcgtcgaggggtttttggatcacgtgatc
gtcgatgagtatcaggacatcaatacggttcagcaacgactgctcgccgtgctggccggt
tccactgcgagcgttatggcggtgggcgatgccaaccagtgcatatacgagtggcggggg
gcacgccctgatacgatgctggaaaactttaccgcgacgtttggtgacgccaccgactat
ccgctctcaatgacctttcgtcatgggcacgcgctggcgctcacggccaatcacgccatc
atggccaaccgccgacggcctgatcagctctgcttggcaggggctcgcaacccggcgacc
cgcatcaacgcaggtcaaggcagccgttttttgctggatgcgctgatcgattggcaatcg
caagggcgcgctctgagcgatgccagcctgctcgtgcgcagttgggcactgtcggtgccg
ttccagctcgcactgcttcaggcgggtattccctttcgaatgttgcgagaagaccgcttt
gtgtttcgcttgcctttggtgcaggcattggcgggctatctgaagctctccaggcgccca
gagctgttacaggatcccgagcagttgctgctgttattagctcagccaaccccgttcgtt
gccagagagcgcttgcagcgcctggcctaccagcttgcgagtactcagcagtggccggag
cgccatgaacccgtgctggccgcattgaaaccgcttcagcggcgcaccctcaaaaaacgc
tgggaattgctgtgtgagttgccgaggctgagtgcttggccaccggcaaaactgctcagt
cacgtggtcgaggttatcgatgcagaaaagacgttgaagcgtgccgctgcgagacgcgac
aagggggaggaggacgtacgactgctagatgtactgatcgagcaggccgagagtgtacaa
gaccccgatgcgttcatcgaactgctcgagcgccccgtggagaatcaggcgggtggcgta
ttgatcagtacggtgcacggtgccaaaggcctcgaatggcctttggtggcggtggccggg
gtcaacgaagaagactttccttactacagtcacgataaccccctgagcgacgagcgattg
gaagaggagcgaaggctattttacgtcgccattactcgtgccaaagagcagttgctcgtt
ctgcacgatggcggtgtccacaagccaagccgcttcattgctgaaagtgcctggcaagac
ggtatgcgcattgccgagcatcttgcacacgcccagccaccgagtgacccggtagcggtg
aatgcaccaagcttggtcgagcgctacttgaaaaagatcgggcgcgaggatattgccctg
gcggcacctcaggtgaacgaaaccgtggctggttatcgtgtacacagccatttctaccct
ggtcaacggctgctacatgcggtgtttggcgaaggtgaagtggccgccgtcgaaggcaac
ccctccgaccccgtcatcgacgttcgctttgtccaagccggccggcgacgtttgattgcc
cgtcgtgcgcccatcgagatcatggagtccgcaagctag
DBGET
integrated database retrieval system
