Halomonas sp. A020: HaloA020_33230
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Entry
HaloA020_33230 CDS
T10931
Symbol
rluC
Name
(GenBank) pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
haaz Halomonas sp. A020
Brite
KEGG Orthology (KO) [BR:
haaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
haaz03009
]
HaloA020_33230 (rluC)
Enzymes [BR:
haaz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
HaloA020_33230 (rluC)
Ribosome biogenesis [BR:
haaz03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HaloA020_33230 (rluC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
RluD_N
TGS
Motif
Other DBs
NCBI-ProteinID:
BCB62622
LinkDB
All DBs
Position
complement(3567972..3568913)
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AA seq
313 aa
AA seq
DB search
MSEGREVQWVEIAPEQAGQRIDNFLMTRLKGAPRALIYRIVRKGEVRVNKKRVKVDYRLQ
SGDLVRVPPLRLAPKEAVKEVSDNLRDLLVGSVIMEGPDWMVMNKPSGLAVHGGSGVKIG
LIEALRQVRDDLTFLELVHRLDRDTSGCLLLAKSRDALVTLNESLKKHGMDKRYLALVAG
RWPARKTYESARLDRFDAGNGERRVRVDPNGKVSRTHFSVIETFEKVTLIEAEPVTGRTH
QIRVHAAHAGHALLGDDKYATRESAVLTKQLGLGRLFLHARSLTFPEPGNGRPVTVKAPL
PEALEETLKRARQ
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaagggcgtgaagtacagtgggtggaaatcgccccggaacaagcaggtcagaga
atcgataattttttgatgacccgattaaaaggggctccccgcgcactgatttaccgtatc
gttcgtaaaggggaagttcgggtcaataaaaaacgggtcaaagtcgattatcgcctgcag
tcgggtgatttggtgcgagtgccgccgctgcgtcttgcccctaaagaggcggtgaaagaa
gtcagcgataatctgcgcgacctgctggtgggaagcgtgatcatggaagggcccgactgg
atggtgatgaacaagccgtcgggcttggccgtccatgggggaagtggtgtcaagattggc
ttgatcgaggctcttcgccaagtgcgtgacgacctgacgttcttggagttggtgcatcgt
ctcgatcgcgatacttccggctgtttactgctcgccaagtcccgtgatgcgttggttact
ctcaacgagtctttgaaaaaacacggcatggacaaacgctatttggcgctggtggccgga
cgctggcctgcccgcaaaacctacgaaagcgcgcggctggatcgtttcgatgcaggcaac
ggcgagcggcgcgtgcgggtagaccccaatggtaaggtgtcacgcactcacttctccgtg
atcgagacgttcgaaaaagtcacgctgatcgaagcggagccagtgaccggtcgcactcac
caaattcgcgtgcacgctgcccatgcagggcatgcgctattgggtgatgataaatacgcg
acccgtgaaagcgcagtgctgaccaagcaattgggcttgggccgcctctttctacatgct
cgctcgctgacctttccagagcctggtaacggcagacctgtgacggttaaagcgccgctt
ccagaggcacttgaagagacgctcaagcgcgcacgtcaatga
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