Haloarcula sp. CBA1115: SG26_03515
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Entry
SG26_03515 CDS
T03645
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hab
Haloarcula sp. CBA1115
Brite
KEGG Orthology (KO) [BR:
hab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hab03032
]
SG26_03515
03400 DNA repair and recombination proteins [BR:
hab03400
]
SG26_03515
Enzymes [BR:
hab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SG26_03515
DNA replication proteins [BR:
hab03032
]
Prokaryotic type
DNA Topoisomerases
SG26_03515
DNA repair and recombination proteins [BR:
hab03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SG26_03515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
HHH_5
Cdd1
DNA_pol_lambd_f
HHH
Erp_C
DUF4332
HVO_2753_ZBP
Motif
Other DBs
NCBI-ProteinID:
AJF24840
UniProt:
A0A0B5GGX8
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All DBs
Position
730539..733064
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AA seq
841 aa
AA seq
DB search
MRLIITEKDNAARRIAEILSEGSASASRQNGVNVYRWGNTRVVGLSGHVVGVDFPEEYND
WRDVEPVELIDADVTKEPTQENIVTTLKQLAREADEATIATDYDREGELIGKEAYELIRE
ETDAPVDRVRFSSITEREVRDAFANPDDIDFDLAAAGEARQIIDLVWGAALTRFLSLSAR
QLGDDFISVGRVQSPTLKLIVDREREIQAFDPEDYWEIFADLQKNGSGFEAQYFYDDDGK
EAERVWVEDDADDAYADLTGVNAATVTSVRRRTRTDSPPTPFNTTAFISAASSLGYSAQQ
AMSIAEELYTTGYITYPRTDNTVYPDDLEEDALLDEFVGAGHFGEDAEKLLEQDDITATE
GDEETTDHPPIHPTGEIPPKVDLSDDEWEIYELVVRRFFATVAEAATWEHLRVVADAGGR
SLKANGKRLVEPGYHEVYPYSSASENHVPDVEEGEELAISEVRMEAKQTQPPRRYGQSRL
IQTMEDKGLGTKSTRHNSIEKLYDRGYIEGDPPRPTTLAMAVVEAAEEFADHVVSDEMTA
QLEADMTAIANGEATLDDVADESREMLKRVFDELRDSREEIGEHLQESLKADKTLGPCPK
CGEDMLVRRSRQGSYFVGCDGFPECRNTLPLPSTGEPQVLEEHCEEHDMHHVKMLAGRDT
FVHGCPRCEAEKADESEDEVIGPCPECGVAPAEQRGDGGEAAEAEGGELAIKHLRSGSRL
VGCTRYPDCDYSLPLPRNGDISVTEAYCEEHDLPELVIDADSDDPWELGCPICNYEEYQA
RTAVEDLEDLSGIGSATAEKLGDAGVDSLAALREADPDIVATEVQGVSATQVREWQDELE
A
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgcggctgattatcaccgagaaagacaacgccgcccgccgcatcgcagagatcctctcc
gaggggagcgcgtccgcgagcaggcaaaacggcgtcaacgtctatcggtgggggaacacc
cgcgtcgtcggcctctccgggcacgtcgtcggcgtcgacttccccgaggagtacaacgac
tggcgcgacgtggagccggtcgaactcatcgacgccgacgtgacgaaggagccgacccag
gagaacatcgtcacgacgctgaagcaactggcccgggaggccgacgaggccaccatcgcg
actgactacgaccgcgaaggggaactcatcggcaaggaggcctacgaactcatccgcgag
gagaccgacgcgcccgtcgaccgcgtgcgcttctcctcgatcaccgagcgggaggtccgg
gacgccttcgccaaccccgacgacatcgacttcgacctggcggccgcgggcgaggcccgc
cagattatcgacctcgtgtggggcgcggcgctgacgcggttcctctcgctgtcggcccga
caactgggcgacgacttcatttccgttggtcgggtccagtcgccgacgctgaagctcatc
gtcgaccgcgagcgcgagatccaggccttcgaccccgaggactactgggagatcttcgcc
gacctccagaagaacggctcgggcttcgaggcccagtacttctacgacgacgacgggaaa
gaggccgagcgggtctgggtcgaggacgacgccgacgacgcctacgccgacctgacgggc
gtcaacgcggcgacggtcacgagcgtccgccgccgaacccgcaccgacagcccgccgacg
ccgttcaacaccaccgccttcatctccgccgccagttcgctgggctactccgcccagcag
gcgatgtctatcgccgaggaactgtacaccaccggctacatcacctacccgcgaacggac
aacacggtctacccggacgacctcgaagaggacgccctgctcgatgagttcgtcggagcc
ggacacttcggcgaggacgccgagaagctgctggagcaagacgacatcaccgcgaccgag
ggcgacgaggagaccaccgaccacccgcccattcacccgacgggagagattccgccgaag
gtcgacctctcggacgacgagtgggagatctacgaactggtcgtccggcgcttcttcgcg
acggtcgccgaggccgcgacgtgggagcacctccgcgtcgtcgccgacgccggcggccgc
tcgctgaaggccaacggcaagcgcctggtcgaaccgggctaccacgaggtgtacccctac
tccagcgccagcgagaaccacgtccccgacgtggaggagggcgaggaactggccatctcc
gaggtccggatggaggccaagcagacccagccgccgcgccgctacggccagtcacggctc
atccagaccatggaggacaaggggttggggacgaagtcgacccgtcacaattcaatcgag
aagctgtacgaccgcggctacatcgagggcgatccgccccggccgacgacgctggcgatg
gccgtcgtcgaggccgccgaggagttcgccgaccacgtcgtcagcgacgagatgaccgcc
cagttagaggcggacatgaccgccatcgccaacggcgaggcgacgctcgacgacgtggcc
gacgagtcccgcgagatgctcaaacgggtgttcgatgaactgcgtgattcccgcgaggag
atcggcgagcacctccaggagtcgctgaaggccgacaagacgctcggtccctgtccgaag
tgcggcgaggacatgctcgtccggcgctcgcgtcaggggtcgtacttcgtcggctgtgac
ggcttccccgagtgtcgcaacacgctcccgctgccgtcgacgggcgagccgcaggtgctc
gaagagcactgcgaggaacacgacatgcaccacgtcaagatgctcgccggccgggacacg
ttcgtccacggctgtccccgctgtgaggccgagaaggccgacgagagcgaggacgaggtc
atcgggccgtgtcccgagtgtggcgttgctccggcggagcaacgaggcgacggcggcgaa
gccgccgaagcggagggtggcgaactcgccatcaaacacctccgttcgggctcccggctc
gtcggctgtacgcgctaccccgactgcgactactcgctgccgctgccccgcaacggcgat
atctcggtgacggaggcctactgcgaggagcacgacctgcccgaactggtcatcgacgcc
gacagcgacgacccctgggaacttggctgtcccatctgcaactacgaggagtaccaggcc
cgcaccgctgtcgaggacctcgaagacctgagcggcatcggctcggcgaccgcggagaag
ctcggcgacgccggtgtcgattcgctggcggcgctccgggaggccgaccccgacatcgtc
gctaccgaggtgcagggcgtcagcgccacgcaggtccgggagtggcaggacgaactggaa
gcctga
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