Haloarcula sp. CBA1115: SG26_04485
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Entry
SG26_04485 CDS
T03645
Name
(GenBank) transcription initiation factor IIB 2
KO
K03124
transcription initiation factor TFIIB
Organism
hab
Haloarcula sp. CBA1115
Pathway
hab03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hab00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
SG26_04485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hab03021
]
SG26_04485
Transcription machinery [BR:
hab03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
SG26_04485
Prokaryotic type
Archaeal type
TFB
SG26_04485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Trm112p
Zn_ribbon_tTFIIB
Sigma70_r4
Zn_ribbon_LysW
HTH_Tnp_ISL3
Anti-TRAP
DZR_2
Cyclin_C
DUF5817
A2L_zn_ribbon
Motif
Other DBs
NCBI-ProteinID:
AJF25026
UniProt:
A0A0B5GKQ2
LinkDB
All DBs
Position
923827..924792
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AA seq
321 aa
AA seq
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MSEHTRTRQQHEEQTTESTESESTACPECSGSLVIDDEHGETVCEDCGLVVESDEIDRGP
EWRAFDSSEKDEKSRVGAPTTNMMHDKGLSTNIDWRDKDAYGNSLSGKQRQKMQRLRKWN
ERFRTRDSKERNLKQALGEIDRMASALGLPENVRETASVIYRRALDEDLLPGRSIEGVST
ASVYAAARQAGVPRSLDEITEVSRVEKSEIARTYRYVVRELSLEVRPADPESYVPRFASS
LELSDEAEHRARQLLQNAKEQGVHSGKSPVGLAAAAVYAAALLTNEKTTQAAVSEVADIS
EVTIRNRYHELLEAEQDLPVA
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaacacacacggacgcgacagcaacacgaggaacagacgactgagtcgacggaa
tcggagagcactgcgtgcccggagtgcagtggctcgctcgtcatcgacgacgaacacggc
gaaacggtctgtgaggactgtggcctcgtcgtcgagtccgacgaaatcgaccgcggcccc
gagtggcgcgcattcgactccagcgagaaagacgagaagtcccgcgtcggcgcaccgacg
acgaacatgatgcacgacaagggcctctcgacgaacatcgactggcgcgacaaggacgcc
tacggcaactccctctctggcaaacaacgccagaagatgcagcgtctccgcaagtggaac
gagcggttccgcactcgcgactccaaggagcgcaacctcaagcaggccctcggtgaaatc
gaccgtatggcctccgcgctcggactgccagaaaacgtccgcgagacggccagcgtcatc
taccgccgcgcgctggacgaggacctgctccccggccgctccatcgagggcgtttcgacg
gcgtccgtctacgccgccgcgcgacaggctggcgtcccacgctcgctcgacgagattacg
gaggtctcccgcgtcgagaagagcgaaatcgcccggacctaccgctacgtcgtccgcgaa
ctctcgctcgaagtccgccccgcggaccccgagagctacgtcccgcggtttgcctcctcg
ctggaactgtctgacgaggccgaacaccgcgcccgccagctcctccagaacgccaaggaa
cagggcgtccactccggcaagtccccggtcggcctcgccgccgccgcagtgtacgcggcc
gccctgctgaccaacgagaagacgacccaggctgccgtctccgaggtcgccgacatctcc
gaggtcaccatccgcaaccgctaccacgaactgctggaagccgagcaggacctccccgtc
gcgtaa
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