Haloarcula sp. CBA1115: SG26_05240
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Entry
SG26_05240 CDS
T03645
Name
(GenBank) transcription initiation factor IIB 2
KO
K03124
transcription initiation factor TFIIB
Organism
hab
Haloarcula sp. CBA1115
Pathway
hab03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hab00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
SG26_05240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hab03021
]
SG26_05240
Transcription machinery [BR:
hab03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
SG26_05240
Prokaryotic type
Archaeal type
TFB
SG26_05240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Zn_ribbon_tTFIIB
Cyclin_C
Trm112p
Cas12f1-like_TNB
Auto_anti-p27
DZR
DUF8054_C
DUF1272
DZR_2
Sigma70_r4
Zn_ribbon_RRN7
Motif
Other DBs
NCBI-ProteinID:
AJF25171
LinkDB
All DBs
Position
complement(1084572..1085591)
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AA seq
339 aa
AA seq
DB search
MTTRSIYSPDERDESADEQAESEASTGHACPDCGGSLVTDDSRGETVCESCGLVVDEDEI
DHGPEWRAFDSQERDNKRRVGAPTTEMKHDKGLSTNIGWQNKDAYGNSLSTRQREKMQRL
RTWDERFRTRDHAERNLKQALGEIDRMGSALGVPESARETASVIYRRALDEGMLPGRSIE
GMATAALYAAIRQSNLPQTLDDMAVVSRVDEMEFTRAYRYLNRELSLQVGPPDPATYLSK
FISELDADDALERQARALIEAGKEANVHSGKSPVGLAAAAIYAAGLLLGEEMTQETVSEA
TDISTVTIRERYRELLEAEAELDDSAVDATSGAESGASA
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgacgacacgcagcatctattcccccgacgaacgcgatgaaagtgcggacgaacaggcc
gagtccgaggcgagcactggccacgcctgcccggactgtggcggaagcctcgtcaccgac
gacagtcgcggcgagacggtctgtgaatcctgcggcctcgtcgtcgacgaggacgagatc
gaccacggcccggagtggcgcgccttcgacagccaggagcgcgacaacaagcgccgcgtc
ggtgccccgacgacggagatgaaacacgacaagggcctctcgaccaacatcggctggcag
aacaaggacgcctacggcaattctctgtcgacgcgccagcgcgagaagatgcagcgcctg
cggacctgggacgagcggttccgcacccgcgaccacgccgagcgcaacctcaagcaggcg
ctgggcgagatcgaccggatggggagcgctctcggcgtccccgagagcgcccgcgagacg
gccagcgtcatctaccgccgtgccctcgacgagggaatgttgcccggtcgctccatcgaa
gggatggcgactgccgcgctgtacgccgcaatcagacagtcgaacctcccgcaaacgctc
gacgacatggccgtcgtcagccgcgtcgacgagatggagttcacccgcgcgtaccgctat
ctcaaccgcgaactctcgctgcaggtcggcccgccggaccccgcgacctacctcagcaag
ttcatctcggaactcgacgccgacgacgccctcgaacgccaggcccgcgccctcatcgag
gcggggaaggaagcgaacgtccacagcggcaagagccccgtcggcctcgccgccgcggcc
atctacgccgccggcctgctgctcggcgaggagatgacccaggagaccgtcagcgaggcc
acggacatcagcactgtgaccatccgcgagcgctaccgcgaactgctggaagccgaagcg
gaactcgacgacagcgccgtcgacgcgacgagcggcgctgaatccggtgcgagcgcctga
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integrated database retrieval system
