Haloarcula sp. CBA1115: SG26_09045
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Entry
SG26_09045 CDS
T03645
Name
(GenBank) tRNA splicing endonuclease
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
hab
Haloarcula sp. CBA1115
Brite
KEGG Orthology (KO) [BR:
hab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hab03016
]
SG26_09045
Enzymes [BR:
hab01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
SG26_09045
Transfer RNA biogenesis [BR:
hab03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
SG26_09045
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-ProteinID:
AJF25863
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Position
1811629..1812663
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AA seq
344 aa
AA seq
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MELTLDGDVVRAGYEARERFYDSRGYGKVRNGDIDLSPVEAAHLLYRGDIESIDGMDFRA
FLGSAAVSEVDFAVYKDLRDRGFYLTPAREGWVDDAAGADFVVYPRGKGPWDNEVAYRVR
VIGERDTVDATALGGCVLAVVDEESEVTYLDTDRREVSGTSDAAVPATAGELLGERVVCW
EPPAELYDQAFYGQQLGDDGAVQLSLVEAAYLAQEGLLTVDGGADAVVGRGREVEGDRFD
RRLAVYAALRASGVAPKTGFKFGADFRTYADVESAENLGHSELLVRVLPADHRFEPRDLA
LDVRLAHGVRKTMVFALTADGGDGSGDSGNGNDLEWIAVERLTP
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atggaactgacgctcgacggtgatgtcgtgcgggccggctacgaggcgcgcgagcggttc
tacgactcgcgcggctacgggaaggtccgcaacggcgacatcgacctgtccccggtggag
gccgcacacctcctctaccgcggagatatcgagagcatcgacgggatggacttccgcgcg
ttcctcgggtcggcggccgtctccgaggtcgatttcgccgtctacaaagacctgcgggac
cgcggtttttacctcacgcccgcccgcgaaggatgggtcgacgacgccgcgggcgcggac
ttcgtggtctacccgcggggaaaggggccgtgggacaacgaagtggcctaccgcgtccgg
gttatcggcgagcgtgataccgtcgacgcgacggccctgggcggctgcgtgctggcggtc
gtcgacgaggagagcgaagtgacgtacctcgataccgaccgacgcgaggtctccgggacc
agcgacgccgccgtcccagcgacggcgggtgaactgctcggagagcgggtggtgtgctgg
gaaccgccggcggagctgtacgatcaggcattctacgggcagcaactcggcgacgatggc
gcggtccagctctcgctcgtggaggccgcgtatctcgcacaggaggggctgctcacggtc
gatggcggggccgacgctgtcgtcgggcggggtcgcgaggtcgagggcgaccgcttcgac
cgtcggctggccgtctatgcggctctgcgagcgagcggcgtcgctccgaagaccggcttc
aaattcggcgcggacttccggacctacgccgacgtcgaaagtgccgagaaccttgggcac
tcagagctactggtgcgggtgctgccggccgaccaccgcttcgagccgcgggacctcgcg
ctggacgttcgcctggcccacggcgtccggaagacgatggtgttcgctctcacggcggac
ggcggcgacggtagtggcgatagcggcaacggcaacgatctcgagtggatcgccgtcgag
cggctgacgccctga
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