KEGG   Haloarcula sp. CBA1115: SG26_11830
Entry
SG26_11830        CDS       T03645                                 
Name
(GenBank) endonuclease
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
hab  Haloarcula sp. CBA1115
Pathway
hab03030  DNA replication
hab03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:hab00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SG26_11830
   03410 Base excision repair
    SG26_11830
   03450 Non-homologous end-joining
    SG26_11830
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hab03032]
    SG26_11830
   03400 DNA repair and recombination proteins [BR:hab03400]
    SG26_11830
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:hab04147]
    SG26_11830
DNA replication proteins [BR:hab03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    SG26_11830
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     SG26_11830
DNA repair and recombination proteins [BR:hab03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     SG26_11830
Exosome [BR:hab04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   SG26_11830
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc 5_3_exonuc_N
Other DBs
NCBI-ProteinID: AJF26370
UniProt: A0A0B5GKI2
LinkDB
Position
complement(2359077..2360057)
AA seq 326 aa
MGNADLRSLAALSDVSFGDLGGSVVAVDAHNWLYRYLTTTVKFTSESKYTTSDGEEVANL
IGVIQGLPKFFEHDLTPVFVFDGAVTDLKDDEVEKRREQREKYESELEAAREAGDSTRVA
KLDSRTQRLTDTIVDTTRDLLELLDVPIVDAPAEGEGQASVMARRGDVDYVGTEDYDALL
FGAPMTLRQITSKGDPELMDFEATLEQHDLTWEQLVDAAILMGTDFNEGISGIGPKTAVT
ELHEHGDLYAVLEARDEHIDHADRIRNLFLDPEVTDDYEIPDSIEPDVDAARAFVTDKWE
VDADEVARGFERIDESVVQTGLDRWA
NT seq 981 nt   +upstreamnt  +downstreamnt
atgggaaacgctgatttacggtcgctcgcggcgctgtcggacgtgtcgttcggcgacctc
ggcgggagcgtcgtcgccgtagacgcccacaactggctctatcgctatctgacgacgacg
gtgaagttcaccagcgagtcgaagtacaccaccagtgacggcgaggaagtggcgaacctc
atcggcgtcatccaggggctaccgaagttctttgaacacgacctcacgccggtgttcgtc
ttcgacggcgcggtcacggacctcaaagacgacgaggtcgagaaacgccgcgagcaacgc
gagaagtacgagtccgaactggaggcagcccgggaagcgggtgacagcacccgcgtcgcc
aagcttgactcccgcacgcagcggctgaccgataccatcgtcgacacgacgcgggacctg
ctggaactgctcgacgtgcctatcgtcgacgcccccgctgaaggcgaagggcaggcgtcg
gtgatggcccggcggggcgacgtggactacgtcgggacggaggactatgacgcgctcctg
ttcggtgcgccgatgacgctccgccagattacgtcgaagggcgaccccgagctgatggac
ttcgaggcgacactcgaacagcacgacctcacctgggagcaactggtcgacgccgccatc
ctgatggggacggacttcaacgaggggatctccggtatcggtcccaagaccgccgtgacg
gaactccacgagcatggcgacctctacgccgttctcgaagcccgggacgaacacatcgac
cacgccgaccgcatccggaacctgtttctcgaccccgaagtcaccgacgactacgagatt
ccggacagcatcgagccggacgtcgacgccgcccgcgcgttcgtcaccgataagtgggag
gtcgacgccgacgaggtcgctcgcgggttcgagcgcatcgacgagtcggtcgtccagacg
gggctagaccgctgggcgtga

DBGET integrated database retrieval system