Haloarcula sp. CBA1115: SG26_19010
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Entry
SG26_19010 CDS
T03645
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
hab
Haloarcula sp. CBA1115
Pathway
hab03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hab00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
SG26_19010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hab03021
]
SG26_19010
Transcription machinery [BR:
hab03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
SG26_19010
Prokaryotic type
Archaeal type
TFB
SG26_19010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Auto_anti-p27
Sigma70_r4
TruB_C
Cyclin_C
Cas12f1-like_TNB
Zn_ribbon_NUD
HTH_11
Motif
Other DBs
NCBI-ProteinID:
AJF27863
LinkDB
All DBs
Position
unnamed2:complement(56985..57974)
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AA seq
329 aa
AA seq
DB search
MSTDSSSVATKHTEQPERNSAETHDRLSTIDQCPECSVVKLRRDGTERYCPECGLVVDED
CIDYGPEWTPYDAEERRRVGGPVTNSRHDWGISAEIGRYRDARGQQLPAAKRRKLHRLRR
WDRQAQFEGKAEQNLAHGLSEVRRIVGSLDLPESICTQACVLYRTAATEDLIRGRSIEAM
AAAGVYAACRCSGLPRTIDEVGEVSTVSRERVSNAYSVLNHELNLPAVPMAPVQYVPRFA
SDLDLSREVRQRALELAREASEVGLGNGCRPTGVAAACIYEAAREADENVTQTSLAELAS
VSAMTLREQWKKLQSMLEHEEESGLEVHG
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgtctacagattcatccagcgtcgcgaccaagcacactgaacagcctgagaggaacagt
gctgagactcacgaccggctctctacgatcgatcagtgccccgagtgctctgtggtcaag
ctcagacgagacggtaccgagaggtactgtcctgagtgtgggctcgtcgtcgacgaggat
tgtatcgactacgggcctgaatggacgccatatgacgccgaagagcgacgtcgcgttggt
gggccagtgacgaattcacgccacgactggggcatctctgcagagatcggccggtatcgc
gatgcacgagggcagcaacttccggctgcgaaacgtcggaaactgcaccggcttcggcga
tgggaccgccaagcccagttcgaagggaaagctgagcagaaccttgcacatgggctctcg
gaagtccggcggatcgtcggttcgctcgaccttcctgagagcatctgtacgcaggcgtgc
gtcctctatcggactgctgcgaccgaggacctcatccgtggtcgctcgattgaagcaatg
gcggctgccggcgtgtatgcagcctgtcgatgttcgggactccctcggacaatcgacgag
gtcggagaggtgtcgactgtctccagagagcgggtcagcaacgcgtacagcgtgttgaat
cacgaactgaatctcccggccgttccgatggctcccgttcagtatgtcccacgattcgca
tcggacctcgatctctcacgagaagtgcgccaacgcgccctggagttggcccgagaagcg
tccgaagtcggtctcgggaacggctgtcgaccaaccggcgttgccgctgcctgcatctac
gaggccgctcgtgaggctgacgagaacgtcacccaaacgagtctcgccgagctcgcgagt
gtctccgctatgacgctccgtgagcaatggaagaaactccaatcgatgctcgaacacgaa
gaggagtctggattggaggtacacggatga
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