Halomonas sp. BDJS001: OM794_00015
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Entry
OM794_00015 CDS
T10426
Symbol
recF
Name
(GenBank) DNA replication/repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
habd Halomonas sp. BDJS001
Pathway
habd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
habd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
OM794_00015 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
habd03400
]
OM794_00015 (recF)
DNA repair and recombination proteins [BR:
habd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
OM794_00015 (recF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_29
AAA_15
AAA_21
AAA_16
AAA_27
DUF4072
AAA_13
ABC_tran
AAA_7
NACHT
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
UZH10193
UniProt:
A0A9E8D6T0
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All DBs
Position
2755..3858
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AA seq
367 aa
AA seq
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MSLTLLNFHAVRNLQPVEMTPSSRVNVISGANGSGKTSLLEGIHILGMGRSFRTRQLKHV
IQMDQPYMTLYGRLSGEPEVTLGVRRLRAQRELELRLKGDKHARLAELVEAMPLQLINPD
AFRLLEGSPAGRREFLDWGVFHVKHDFLAIWKHTRRALKHRNALLRRGRIHPQEMAVWEH
ELAVWGEQMDTLRRDWFSNFLPVFEETLKVLLPLPGLSLHYARGWDKERSLAAVLHDSRP
TDQQMGFTQQGPQRADLRIRINKQPAVEVLSRGQQKLVVSALKLAQGRFLERTAQRHCIY
LIDDLPAELDEQNRQQFCELLEDMQCQAFITSVEPSALKNAWRTGTPVGMFHVKHTKEGL
SELLSDS
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgacactgcttaattttcacgctgtgcgcaacctgcaacctgttgagatgacg
ccctcttcgcgggtcaatgttattagtggtgccaatggaagcggaaaaaccagcctattg
gaaggtatccatatcctaggaatggggcgctcttttcgcacgcgccagttaaaacacgtg
atccaaatggatcagccgtatatgacgctgtatgggcgtttaagtggtgagcctgaggtt
acccttggcgtacgccggttacgtgcgcagagggagcttgagctgcgtttgaaaggtgac
aagcacgctcggttggcggagctggtagaggcgatgccacttcagttaattaacccggat
gcttttcgattgcttgaaggttctcccgccggtcggcgtgagtttcttgactggggtgtg
tttcacgtgaaacacgattttttagcaatctggaagcatacccggcgtgcgttgaaacat
cggaatgcgctgctcaggcgtggtagaatacatcctcaggaaatggcggtgtgggagcat
gagctagccgtttggggcgagcagatggatacgctacgtcgagattggttcagcaacttt
ttaccggtctttgaagagacccttaaagtgctacttcccttgccgggtttgtcgctccat
tacgccagaggttgggacaaagagagatctcttgcggcggtgttacatgatagtcggcca
accgatcagcagatggggtttactcagcaagggccacagcgcgcagacttacgcatcagg
ataaataaacagcctgctgttgaagtgctttccagaggccagcaaaagttagtggtgagt
gcgttaaagctcgcccaggggcggtttctggaaagaacagcacagcggcactgtatttat
cttatcgatgatttgccagcagagcttgacgagcagaataggcaacagttttgtgagcta
ctcgaagatatgcagtgccaagcatttattaccagtgtcgaaccttctgcattaaaaaat
gcctggcgaactggaacccctgtaggaatgtttcacgtgaaacataccaaagaggggctc
agtgagttgttaagcgatagctag
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