Halomonas sp. BDJS001: OM794_01940
Help
Entry
OM794_01940 CDS
T10426
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
habd Halomonas sp. BDJS001
Brite
KEGG Orthology (KO) [BR:
habd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
habd03016
]
OM794_01940 (truB)
Enzymes [BR:
habd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
OM794_01940 (truB)
Transfer RNA biogenesis [BR:
habd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
OM794_01940 (truB)
Prokaryotic type
OM794_01940 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
UZH10548
LinkDB
All DBs
Position
372244..373164
Genome browser
AA seq
306 aa
AA seq
DB search
MARQRRGLPVNGVLLLDKPKGVSSNHALQRVRRLFQAQKAGHTGTLDPMATGLLPICLGE
ATKFSSHLLEADKVYRTRIELGVITDTGDAEGTVMEQHEVPSLSVDDVEAVLSRFRGEID
QVPPMYSALKHNGKKLYELAREGKQVERAARRVSVYDARLLAFEDTAFELEVSCSKGTYI
RTLAEDIGQALGCGAHISQLRRLKTGPFLADAMWTLEALEALADQAALEAELMPVDVLVD
HLPLLTVDDTAHSRLAHGQPAALETGALAPDEVARLYYAETFIGLGVVKGAQEVAPKRLL
STVAIS
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcgtcaacgtcgcggcttgccggttaatggcgtactgctgctggataagcccaag
ggcgtttccagtaaccatgcattgcagcgagtccgccgactgttccaggcccaaaaagcc
gggcacaccggcacgctagacccaatggcaaccggcttattgccgatttgcctgggcgaa
gcgaccaagttctcgtcgcacttgctggaagccgacaaggtgtatcgcacccggattgaa
ctgggggtgatcaccgataccggcgatgcggaaggtacggtgatggagcagcacgaggtt
cccagcctaagcgtcgatgacgtggaggctgtgcttagccgttttcgcggtgagattgac
caagtgccgccgatgtactcggccttaaagcataacggcaaaaaactttacgagttggcc
cgtgaaggcaagcaggtagagcgtgcagcccggcgcgtaagcgtgtatgatgcgcgcctg
ctagcgtttgaagacactgctttcgagctggaagtaagctgcagtaaaggcacttacatc
cgcacgttagccgaagatattggccaagcgcttggctgtggcgcgcacatcagtcaacta
agaaggctcaaaacggggccctttttagccgacgcgatgtggacgctagaggccttggaa
gcattggccgaccaagcggcactggaagctgagcttatgcccgtggatgtgctggtggat
catttgccgttactgacggtagacgacaccgcccattctcgtttggcccacggccagccc
gctgctctcgaaaccggcgcattagccccggacgaagtagcccgactttattacgccgag
acgtttatcggccttggcgtagtgaaaggtgcccaggaagtggcaccaaagcggctgtta
agtactgtcgctatctcgtaa
DBGET
integrated database retrieval system
