Halomonas sp. BDJS001: OM794_03505
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Entry
OM794_03505 CDS
T10426
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
habd Halomonas sp. BDJS001
Brite
KEGG Orthology (KO) [BR:
habd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
habd03016
]
OM794_03505
Enzymes [BR:
habd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
OM794_03505
Transfer RNA biogenesis [BR:
habd03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
OM794_03505
Prokaryotic type
OM794_03505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
Lactamase_B_4
PDEase_II
REase-ARP
3Beta_HSD
Motif
Other DBs
NCBI-ProteinID:
UZH10837
LinkDB
All DBs
Position
725633..726595
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AA seq
320 aa
AA seq
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MNLLFLGTSAGVPTKTRNVSGIALRESKGKGWYLIDCGEGTQHQVLHTKLSFHSLKAIFI
THVHGDHCYGLPGILASAGMGGRKAPLSIVAPAGIKAWLEATCEVTQLCLPFALEFIDSD
ELPSVEFESMAVTTFRLSHRAPSYAYGFTERKVDADLNIEKLTQKGIPRGPMWGQLKQGF
DIEFAGEQLKSHDFLIFKNKPRKIVIAGDNDQPDLLRDACEGAQVLVHEATYTEEMAQKA
SDVGHSYAKLVAVFAESAQLPNLVLTHFSPRYQLHPLASPSIEEIRQEALRAYSGSLYLA
RDFSEYTLDKAGHFSEMAGE
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgaacttattgtttcttggaacctccgccggcgtacccaccaaaaccagaaacgtctcc
ggtatcgccttgcgcgagagcaaggggaagggctggtacctgatcgattgcggtgagggc
actcagcatcaggtcttgcacaccaagctgtcgtttcattcgctgaaagccatctttatt
acccacgtgcacggcgaccactgctatgggctgccgggcatactggcgagtgcgggaatg
ggtggccgaaaagcgccactgtccattgtggcgcccgcaggcatcaaggcatggttggag
gccacctgtgaggtcacgcagctatgtttacctttcgctttggagtttatcgactcggac
gagctgcccagcgttgagtttgaaagcatggcggttaccacgttcaggctttcacaccgg
gcgccgtcctatgcttatggatttacggagcgaaaggtcgacgctgatttaaacattgaa
aagctgacccaaaaaggcattccgagagggcccatgtgggggcagttgaagcaagggttt
gatattgagttcgcgggcgagcagttaaaaagccatgacttcttgatcttcaaaaacaag
cccaggaaaatagtgatcgcaggtgacaatgaccagcctgacttgttgagggatgcctgc
gaaggggcacaggtgctggtgcacgaagccacctacaccgaagagatggcccagaaggcc
agtgatgtcgggcatagctacgccaagcttgtcgcggtgtttgccgaatcagcacaactg
cccaacctagtgctgacgcactttagcccccgttaccagctccacccccttgcctcgcct
tccattgaggagatccgccaagaggccctgcgcgcctattcgggctcgctttacctggcg
cgggattttagtgaatacaccctggataaagcgggccacttttctgaaatggcgggcgaa
tag
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