Halomonas sp. BDJS001: OM794_03620
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Entry
OM794_03620 CDS
T10426
Symbol
csiR
Name
(GenBank) DNA-binding transcriptional regulator CsiR
KO
K15735
GntR family transcriptional regulator, carbon starvation induced regulator
Organism
habd Halomonas sp. BDJS001
Brite
KEGG Orthology (KO) [BR:
habd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
habd03000
]
OM794_03620 (csiR)
Transcription factors [BR:
habd03000
]
Prokaryotic type
Helix-turn-helix
GntR family
OM794_03620 (csiR)
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Ortholog
Paralog
GFIT
Motif
Pfam:
FCD
GntR
Motif
Other DBs
NCBI-ProteinID:
UZH10858
LinkDB
All DBs
Position
complement(748021..748740)
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AA seq
239 aa
AA seq
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MEPGFKAETSQERDAPRQNLAISAYRQLKHDIIRGRYAPEQKLLMSRLKEQYGASTGPLR
EALSQLVADRLVVAISQRGYRVAPMSLAELNDIYDARAQLEGLILRLAIERGDDEWEATV
LATAHRLAKVTDINTPDDLLDIWDQRHKAFHTAIASGCNSPHLLQMRNTLFDQVERYRHL
WLQETVMSSKALALKRQEHAALVEVILARDTAQADTLMRDHLMTPVPIITRVLEARGIN
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atggagcccggttttaaagcggaaaccagtcaggagagagacgcgccgcggcaaaatctc
gccatcagcgcctaccgtcaactcaagcatgacatcattcgcggccgctatgcgccggaa
cagaagctcttgatgagccgcctgaaagagcagtacggcgccagtaccggaccactgcgg
gaagcactctcacagctggtcgctgaccgcttggtggtggccattagtcagcgcggctac
cgggtagcgccaatgtcgctggccgaactcaacgacatttatgacgcccgcgcacagctc
gaagggctgatcctgcgcttggctatcgaacgcggcgacgatgagtgggaagccacggtg
ctggccaccgcgcaccggctggccaaggttaccgacatcaacacccccgacgacctgctc
gacatctgggatcagcgacacaaagcgttccataccgccattgccagtggatgcaactcc
cctcacctgctgcaaatgcgcaataccctgtttgatcaggtggagcgttaccgccacctg
tggctacaggaaacggtgatgtcgtctaaagcgttagcgcttaaacgccaggagcatgcc
gccctggtggaggtcattctagctcgtgacaccgcccaggctgacaccttaatgcgcgac
catttgatgaccccagtgccgattatcactcgtgtcctcgaagcacgaggtattaactaa
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