Halomonas sp. BDJS001: OM794_03695
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Entry
OM794_03695 CDS
T10426
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
habd Halomonas sp. BDJS001
Pathway
habd00541
Biosynthesis of various nucleotide sugars
habd01100
Metabolic pathways
habd01250
Biosynthesis of nucleotide sugars
Module
habd_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
habd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
OM794_03695 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
habd01005
]
OM794_03695 (kdsA)
Enzymes [BR:
habd01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
OM794_03695 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
habd01005
]
Lipid A
OM794_03695 (kdsA)
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Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
DUF7139
Motif
Other DBs
NCBI-ProteinID:
UZH10873
UniProt:
A0A9E8D7N7
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Position
770439..771326
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AA seq
295 aa
AA seq
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MASQDRSQEPSQDGSQERHINVAGLTAGNSLPLMLLGGMNVLESAELADEVAQAYVTVTQ
KLGLPYVFKASFDKANRSSIHSYRGPGIEKGLQILADIKARHNVPIITDVHEPWQAQAAA
EVADIIQLPAFLARQTDLVVAMAKTGAVINIKKPQFLAPHEMRHILSKFQEAGNDQLMLC
ERGSSFGYNNLVVDMLGFGDMKQTGYPVFFDVTHALQRPGGRADSADGRRAQVAELARAG
VAVGLAGLFLEAHPDPDNAKCDGPCALPLDQLEPFLTQLVQLDALVKGFEPLTIR
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggcttctcaagaccgttctcaagagccgtctcaagatggatcgcaagagcgccatatt
aacgttgccggcttaaccgccggcaactccttgccgctaatgttgttgggcggtatgaac
gtgctggagtctgcggagcttgccgacgaagtcgctcaagcctacgtgactgtgacccag
aagctggggttgccctatgttttcaaggccagcttcgataaagccaaccgcagctccatc
cactcctaccgtggccctggtattgaaaaagggctgcagattcttgccgatatcaaagct
cgccacaacgtgccgatcattaccgatgtgcatgagccgtggcaggcgcaagcagccgct
gaagtggctgatattattcaactgccggcctttttggctcgccagactgatttggtcgtg
gccatggccaaaaccggcgccgtcatcaatatcaaaaagccgcagtttttggcgccccat
gaaatgcgccatatcctcagcaagttccaggaagcgggtaacgatcagctgatgctctgc
gagcgtggctcaagctttggttacaacaacctggttgtggatatgctcggctttggtgat
atgaagcagaccggctatccggtattttttgatgtgacccatgcgctgcaacgccctggt
gggcgggccgacagtgcagacgggcgccgcgcacaggtggcggagttagcgcgtgcaggt
gtggctgttggccttgccgggctgtttttagaggcccaccctgacccagacaacgccaag
tgcgatggcccctgtgcgctgccgctggatcagctagagccgttcttaactcagcttgtg
cagctggatgcgctggtcaaggggtttgaaccgctaaccattcgctaa
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