Halomonas sp. BDJS001: OM794_03845
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Entry
OM794_03845 CDS
T10426
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
habd Halomonas sp. BDJS001
Brite
KEGG Orthology (KO) [BR:
habd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
habd03036
]
OM794_03845 (smc)
Chromosome and associated proteins [BR:
habd03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
OM794_03845 (smc)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
AAA_29
CCDC39
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
UZH10897
LinkDB
All DBs
Position
799050..802544
Genome browser
AA seq
1164 aa
AA seq
DB search
MRLTSIRLVGFKSFVDPVTVPFDGNMTAIVGPNGCGKSNIIDAVRWVMGESSAKTLRGES
MADVIFNGSTGRKPISQASIELKFDNRDGGMGGVYAQYAEIAVKRLVTRDGQSNYFFNGQ
KCRRRDIADLFMGTGLGPRSYAIIGQGMISRLIEARPDDLRSTLEEAAGISKYKERRRET
ENRMRRTQENLERLDDIREELDKQLERLKRQAEAAKRYQDLKEQEYRLKGELALLRGRAL
RAEQSHQESRVRELEIAVEKDVFGVRQCETRLEQAREQHDQLSEVLDRHQQQFFETTTRI
ARLEQDQAHRRSRETQLANDIATARRELDEQRRVSEGDQERLAAIDERFEDLLPEHEALE
EQLERLEQALADATPALEAAEQQWADAETRWRDASRDADRSQDQLRDLEQRIQRLQAENQ
RRRQQRSEVADLTALREEHAVCQAQLTEAEELADGFQTQRDEWQQRYGDAKAAYQQATQT
RDNQRAELSQRQGELASLQALIDAALVDHDPAIGTTLEAHGLADAPQLGEVLQVEPGWET
LVSWLLAPWLNARLVARDQLAALPEALATEWRLIDQTPPAASTSGQRLDSLVKGAGALGE
WLASIHYTQTAEEAEAQVAHLAPGESVVSQDGVWLGRGWLNQQANGEGIDGLLLTRRRYA
ELTAQRESEEEALALAEAQCEAASEAIESLEQAREQQAEQERAHAATLQQLAVKERSLAQ
RLEHLESRATELDEELAQLQEDEAELALTLDEQRARWHVAMEQLESAAQARETSAEQRNR
QREARDQLTQQLAPLKAQQQALALERERLSAERDSLRSQQARSSDSEERLSLRIAELEES
REMLLEPDELAGEELEELLHQREQQEGRLNATKQQAQGLAEQLRNDELARQQHERNLEQS
REQLQQRRMDAQALALKAATQDEQLAELGHNVETLTEQLPQEATETRWQERLESTTDKIR
RLGAINLAAIEEYDQQAERRNYLEAQHAELTEALETLERAIKRIDQETRVRFRETFDQVN
TGLQTLFPRVFGGGAAWLTLTGDDLLETGVAIMARPPGKKNSTIHLLSGGEKALTALSLV
FAIFQLNPAPFCMLDEVDAPLDDANVGRYARLVKEMSENVQFIYITHNKIAMEAAERLMG
VTMQEPGVSRLVSVGIEEAAALVD
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atgcgcttaacgtcgattcgcttagtcgggtttaaatcctttgtggatccggtcacggtg
cctttcgatggcaatatgaccgccatcgtgggccccaacggctgtggtaaatccaacatt
attgacgccgttcgctgggtcatgggggagtcctccgccaaaaccctgcgcggcgaatcc
atggctgacgttatctttaacggctccactggccgtaaaccgatcagccaagcctccata
gagctcaagttcgacaaccgcgacggcggcatggggggcgtttacgctcagtatgcggaa
attgccgttaagcgtttggtcacccgggacggacaatccaactacttctttaacggtcag
aagtgccgtcggcgcgatattgctgatctgtttatgggtaccggcctgggcccgcgctcc
tacgcgattattggccagggcatgatctcgcggctgatcgaagcgcgtcccgatgacctg
cgctcgaccctggaagaggccgcagggatctccaagtacaaagagcgccgccgggaaacc
gaaaaccgcatgcggcgcacccaggagaacctggagcgtctggacgatattcgcgaagaa
ctggataaacagctggagcgtctcaagcgtcaggccgaagccgccaagcgctatcaagac
ttaaaggagcaggagtatcggctcaagggcgagcttgcgcttttacgcgggcgcgccttg
cgggcggagcaatcgcatcaggagagccgtgtccgcgagttggaaatagccgttgaaaaa
gatgttttcggtgtccgccagtgcgaaacccgtctggagcaggccagggagcagcatgac
caactctcagaggtgcttgatcgccaccagcagcagttctttgagaccaccacgcggatt
gcgcgtttagagcaggatcaggctcaccgacgcagccgcgaaacccagctggccaatgat
atcgccaccgcccgacgtgagctggatgagcagcgacgggttagtgagggggatcaggag
cgtttagccgccattgacgagcgctttgaagatttactccccgagcatgaagcgctagag
gagcagctcgaacgcctggaacaggcgctagccgacgcaacccccgcgctggaagccgct
gaacagcagtgggccgatgccgaaacccgctggcgcgatgccagccgtgatgcggaccgc
agccaggatcaactgcgcgaccttgaacagcgtattcagcgtttacaggcggagaatcag
cgccgtcgtcagcagcgcagcgaagtagccgatctgacagcgctgcgcgaagagcatgcg
gtgtgtcaggcccagttaaccgaagcagaggagctggcggacggttttcaaacccaacgc
gatgagtggcagcagcgctatggcgacgccaaggcggcctaccagcaggccactcagacg
cgggacaatcagcgcgctgaactcagccagcgccagggtgagttggcctcacttcaagcg
ttgattgatgccgccctggtggatcacgatccggctatcggcacgaccctggaagcgcat
ggcttggcggatgccccgcagttaggtgaagtgctgcaggtcgagcccggttgggaaacg
ctggtgtcctggctgctggctccctggcttaatgctcgcctggttgcgcgtgatcagcta
gcggctttgccggaagccttagccacggagtggcggctgattgatcaaacaccgccagcc
gcctcaacgtccggccaaagattagacagtttggtcaagggcgctggtgcgttgggtgag
tggttagcaagcattcactatacgcaaacggcagaggaagcggaggcgcaggtagcgcac
ctggctcccggtgaaagcgtggtaagccaggatggcgtttggctgggccgcggttggctg
aaccagcaggccaacggtgaaggcattgatgggctgctattaacccgccgccgctacgcc
gaactgaccgcccaacgtgaaagtgaagaggaagcgctggcgctcgctgaagcgcagtgt
gaagcggccagtgaagccattgagtcgctggagcaggcccgtgagcagcaggccgagcag
gagcgtgcccacgctgccaccctgcagcagctggcggtaaaagagcgcagcctggcccag
cgcctggagcatctggagagtcgcgccactgagcttgatgaagagcttgcccagctacaa
gaggatgaagctgagttagcgcttaccctcgacgagcagcgcgcccgctggcatgtggcg
atggagcagttagagagcgcggcgcaagcacgggaaaccagcgccgagcagcgcaaccgg
cagcgtgaggcacgtgatcagttaacccaacagctcgctccgctcaaagcgcagcagcag
gcgctggcacttgagagggaacgcttaagtgccgagcgtgatagcctgcgctcccagcag
gcgcgttccagtgactctgaagagcgcctctcgctacgtattgccgagttggaagagtcg
cgggaaatgctgcttgagcccgacgaactggcgggagaagagctcgaagagctgctgcac
cagcgcgagcagcaggaggggcgcttaaatgccactaaacagcaggctcagggactggca
gagcagctacgcaatgatgaacttgcccgccaacagcacgagcgcaacctggagcagagc
cgcgagcaactccagcagcggcgaatggatgcccaggcgctagcactcaaagccgcgact
caggacgaacagctggctgaattaggacataacgtcgaaaccctgaccgagcaactgcct
caggaggccactgagacacgttggcaggagcgtctggaaagcaccacggacaagattcgc
cgcctgggggcgatcaaccttgctgctattgaagagtacgatcagcaggccgaacggcgt
aactatctggaagcgcagcacgccgagctgaccgaagcgcttgaaacccttgaacgggca
atcaagcgcatcgatcaggagacccgcgtacgttttcgggaaacctttgatcaggttaat
accggcttacagaccctgttcccgcgggtattcggtggcggtgccgcctggttaacgcta
accggcgatgacctgttggaaaccggcgtggcgattatggcccgcccgccgggtaagaaa
aacagcaccattcatctgctctcgggcggcgagaaggcgcttaccgcgctgtcgctggta
ttcgcgatctttcagcttaacccggccccgttctgtatgctggatgaggtggatgccccc
ttggacgacgccaatgtgggccgctatgcccggttagtgaaagagatgtctgaaaacgtt
cagtttatctacatcacccacaacaagattgccatggaagccgccgagcgcctgatgggg
gtcaccatgcaggagcctggcgtctcgcggttagtctcggtaggtattgaagaggcagcc
gcattggttgattag
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integrated database retrieval system
