Halomonas sp. BDJS001: OM794_04500
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Entry
OM794_04500 CDS
T10426
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
habd Halomonas sp. BDJS001
Brite
KEGG Orthology (KO) [BR:
habd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
habd02000
]
OM794_04500
Transporters [BR:
habd02000
]
Other transporters
Pores ion channels [TC:
1
]
OM794_04500
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
UZH11022
LinkDB
All DBs
Position
942218..944281
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AA seq
687 aa
AA seq
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MFIKVPLKVTTTSFCLLSCLGVGQSWAQESPTSDNTLATLQVTAPRLSRELYATPAAVST
LDREAIAQGQQRTRLDEALVRVPGMFLQNRDNFAQGQRISIRGFGARAPFGVRGITVMVD
GIPYTLPDGQAQLDAIDLDSAERIEVIRGPSSVLYGNAAGGVIDITTADGRDNPGSSVRT
EVGSDGYRKAVVQTGGAQGDWSHHVSFSALNVDGYREQSSTEKYLLNAKLRRELGSDRAL
TAIINLLENPRSEDPGALNAGEVARGRDQAAPNSLALDAGQNVDQQLIGLQYEDLSAGPG
ALYLKGFVAQRDFEQQLPYVGDSRIGYQRDYLGASAEYHHEVSLGNLPLSYITGVDVARQ
DDERFRNDVNGQGVIGEQLAEETQTATSAGVFAQGDLALTEQVTLSLGARFDSVELKVDD
SYLSDGDQSGEQTFNEWSGSAGLSYRYRPQHQVYVNTGTAFETPTFSEFANPAGGGFNPS
VSPQKAWNREVGARGYIAPLAMDYDLTLFSVRVRDELVPYDDGGRTFYQNAGDTDRDGVE
LALGWQLAAQWRLNSALTLASYEFDRFAPPSERFGGNRIPGLPEQTWVNQLTWQGLDERF
ATLETQYTGDMVADNANETEVDSYWLVNLRVGDGWQLGSDTRLNAYVGVRNLLDEEHYAN
VRLNGTFGRFYEPAPGRSVYGGLEVRF
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgttcatcaaagtgccattaaaagtaaccaccacgtctttttgcttattaagctgcctt
ggcgtaggccaaagctgggcgcaagagagtccgacatctgacaacacgctagccacgctg
caagtcacagcgccacgactatcgcgagagctttacgccacgcccgctgcggtttcaacg
ctcgaccgtgaggcgattgcacaggggcagcagcgcacgcggttggatgaggcgttagtg
cgagtgcctggtatgttcttgcagaaccgcgataatttcgcccaaggccagcgaatctcc
attcgcggcttcggcgctcgggcgccgtttggcgttcgtggtattaccgtcatggtggat
ggcattccctatacgctacccgatggccaggcgcagttagatgccattgatctggacagc
gctgagcgcatcgaagtgatccgcgggccctcttcggtactttacggcaacgcggcgggt
ggggtgattgacatcaccaccgccgatgggcgcgataatccaggctcaagcgtgcgcact
gaggtgggcagcgatggctaccgtaaggcagtcgtacaaactggtggagcccagggggac
tggtcgcaccacgtcagcttctctgctcttaatgtggatggttaccgggagcagagctct
acagagaaatacctgttgaatgccaaactgcgccgcgaattaggcagcgatcgggcgtta
accgcgattatcaacctgcttgaaaacccccgttccgaagaccccggcgcgcttaacgcc
ggtgaagtggcccgtggccgcgatcaagcggcgccgaactccttagcgttggatgccgga
cagaacgtagatcagcagcttatcgggctacagtacgaagatctgtctgccggccctgga
gcgctctatttaaaaggctttgttgcccagcgcgattttgagcagcagctaccctatgtg
ggcgatagccgtatcggctaccagcgtgactatctgggcgcgagcgctgagtatcatcat
gaagttagtctgggcaacttgccgttgagctatatcactggggtggatgtggcccgccaa
gacgacgagcgttttcgtaacgatgtgaacggccaaggcgttattggcgagcagttggcg
gaagagacccagacggcgacctccgcaggagtgtttgctcagggtgatttagcgctgacc
gagcaggtaacgctctcgcttggcgcgcgttttgatagcgtggagttgaaggtagacgac
agctacctgagcgatggtgaccagagcggtgaacaaaccttcaatgagtggagcggctcg
gcgggacttagctaccgttaccgccctcagcaccaggtctacgtgaataccgggactgcg
tttgaaacgccgaccttctcagagtttgccaatccagcggggggcggtttcaacccctcg
gtatcaccgcaaaaagcctggaaccgtgaagtgggtgcgcgtggctacattgcaccgctg
gccatggactacgatttaacgctgttttcggtgcgcgtgcgtgacgagctggtgccttat
gatgacggcggccgcaccttctaccagaacgcaggcgacaccgaccgcgacggtgtcgag
ctggcgctgggctggcagcttgctgctcagtggcggctgaatagcgccctcacgttggca
agctacgagtttgatcgatttgcgccaccttcagagcgttttggcggtaaccgcattcct
gggctgcctgagcaaacctgggtcaatcagcttacctggcaaggccttgatgagcgcttt
gccaccctggaaacccagtacacgggcgatatggtggcggacaacgctaatgagacagag
gtcgatagctactggctggtgaacctgcgggtgggcgatggttggcagttgggcagcgat
acacggctgaatgcgtatgtgggtgtgcgcaatctcttagatgaagaacactacgccaac
gtacgcttgaacggcacctttgggcgtttctacgaaccggccccggggcgcagtgtttat
ggcgggctagaggtacgtttctaa
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