Halomonas sp. BDJS001: OM794_06570
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Entry
OM794_06570 CDS
T10426
Name
(GenBank) ExeM/NucH family extracellular endonuclease
KO
K07004
uncharacterized protein
Organism
habd Halomonas sp. BDJS001
Brite
KEGG Orthology (KO) [BR:
habd00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99997 Function unknown
OM794_06570
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4214
DUF3616
Exo_endo_phos_3
Exo_endo_phos
LTD
DUF6929
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
UZH11403
LinkDB
All DBs
Position
complement(1427347..1431909)
Genome browser
AA seq
1520 aa
AA seq
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MTNFELVATLYRDILLREPDQAGANYWTAALDNGTADVSTILDSIVTSNEFQLQIQPIIT
LYSVHLLRTADPAGLAYWVNEYRNGLALEEISNSFQASNEFETIVSDLNDTTWLNQLYNS
ALNREPDPEGLMYWSALLADGLSREELAAAFFNGSESIEQQPARVLAPLIGDGSSVDDVE
SLLSRYIEQLESELEEPGEPEEPEEPEEPEEPEEPTEPEEPTEPSNPNFNLGERYHTGTS
DASAAIAVGEGLMLVADDEDQVLRLYERDSDGAPLAEINLNDALGLNDTQEVDLEAVATY
QGTHYWLGSHESSQRSMIFATEVTGDSAESLSIEVTGRFTDLASQLNDWDAQNGHGLGEN
ALSLSLGINVEGAAFIGDSLYLGLRSPLDNGFAQLIPVENAIDLVAGEASEATFGAPLRL
DLDGRAVRSIEPAGDEGYLILAGPVNDDDDVGFGLYLWDGDYAVREIDGPDLNTLPDALT
AKPESLFDVSITESGATASVLFDSGTVDWLEDGQESKDLPAEQQRFISTDIEFTLPDFSP
QAGDIAITSVGGSEKTFQFVALKGISEGAEITFTDSGWAGDGFRSSEGAVKWTAPEGGVS
AGTVVTYTADSSQFTTANSSEVGNNGFNLSVSGDQVLAFVGEASDPTFIYAAQTNSNEWQ
DTADSSNNSALPPGLEEGVTAVAVGSARNAAFSGDGFGTADELLSAIGNPANWSFEQDML
PTNATTDFHVGTMEAIYVPGERDIGLAITEIWSGQSGTDITEDWFEITNRSNETLDFSAQ
SLYYDDDSADPVDAVEIQGLTSLAPGESAIVMVDGNAESVAEFRAAWSNLPNIDSLKIGY
AEDASGLGGGGDAVTLWQGDPRVDGNQVAMEAYPDTDGFDAASWDVDLQAFTTTQSNGAV
SSDALGGKNDDVPAVASPGLANEPQVDITLISAVQGEGDVSPLLDEEVTLEAIVTMVTPG
LDGFFLQEEDSDNDDNAETSEGIFVYAGSGSGEWLDQLAAGDQIRISGKVSEYFEKTQLT
AERNSLEVLDNNLPLPESQRIIMPFTDKQGLEAFEGMRVAIEALEGEPLVVTELYELGRY
GEVTLSSGGRLEQFTEVNAPDVEAYSAWLEDAEARTIKIDDANSSQNPDPIIYGRNGEEL
SATNPLRGGDELQVLEGVLDYNFEEWKVQNVEGLDFTGPARPETPDTDALGDADITAASF
NVLNYFTTLNENGKKTETLNGTLHDPRGANNAEEFARQEAKIVEAINTSGADVVGLMEIE
NNGYGDDSAIATLVDALNADVQDKNIQGVTWAFTVPEDGDGNTTSPGDDAIAVGVIYNSQ
AVTPNGAAATKTDGAFTTANRAPVMQTFVDGNGEEFSVVVNHFKSKGSVVNGEDAIGDGQ
ANNNPTRVKAAEELLEWLGTKPTGSDDSDVLILGDLNAYAMEDPITTLKNAGYDLLDDDY
SYVFDGFWGSLDHALASESLAGQVTGTTTWHINADEASALDYNTDFTNDRQDDNLYADDA
FRSSDHDPILVGLNLGLAEA
NT seq
4563 nt
NT seq
+upstream
nt +downstream
nt
atgaccaattttgagcttgttgctacgttatatcgcgatattctgttgcgggagccggat
caggctggcgctaattattggactgccgcactggataacggaacggccgatgtatcgacc
attcttgactcaatagtaaccagcaatgaatttcagctacaaatccaacctattattaca
ctctatagtgttcacctattacgtacggcagaccctgcaggcctcgcgtactgggtcaat
gagtaccgcaacggcttagctttagaagagatttctaatagttttcaagcgtctaatgag
ttcgaaaccatcgtttccgacttaaacgatactacttggctaaatcagctctacaacagc
gctctgaaccgtgagcctgacccagaaggcttaatgtactggtcagcgctgctggcagat
gggctgtctcgtgaggaacttgccgcagcattttttaacggcagcgaaagcattgaacag
caaccagcacgtgtattagctcctttgatcggcgatggctccagcgtggatgatgttgaa
tcgctactgagtcgttatattgagcagcttgagagtgagctagaggagccaggtgaacct
gaagaacctgaagaacctgaagaacctgaagaacctgaagaaccaacagagcctgaagag
ccaacagagccaagcaacccaaacttcaatctgggagagcgctaccacacgggcacttct
gacgcttcagcagcaattgcagtaggtgagggtttaatgctggtggcggatgatgaagac
caagtgctacgcctctatgagcgcgacagtgacggcgctcctctagcggaaatcaacctg
aatgatgccctgggtttgaatgacacccaagaagtggatttggaagcagtggcgacttac
caaggtacccactactggttaggctcccatgagagcagccagcgttcgatgattttcgcc
actgaagtgaccggtgatagcgctgagagtttgagcatcgaggtgacgggccggtttacc
gatttagccagccaacttaacgactgggatgcccaaaatggccatgggcttggtgaaaat
gcgctgagcctctcgttagggatcaatgttgaaggtgcagcctttatcggtgactccctt
tatctcggcctacgctcgccgctggataatggttttgcacaattaataccggtagaaaac
gcgattgatctggtcgctggtgaggctagcgaagcaacttttggtgcccccctgcgttta
gacctggatggtcgtgcggtgcgctctattgagcctgctggcgatgagggttatctgata
ttggcaggcccggttaacgatgatgatgacgtaggttttggtctttacctgtgggatggc
gactatgccgttcgtgaaatagacggccccgatctcaataccctaccggacgcactaaca
gcgaagccggaatcacttttcgatgtttccatcacagagtcgggcgctaccgcgagcgtt
ctgtttgatagcggtacggtggattggttagaggacggccaagagtctaaagatctgccc
gccgaacagcagcgctttatcagcactgatattgaatttaccttacctgacttctcacca
caggccggtgatattgcgattacctcggtcggaggtagcgaaaaaaccttccagtttgtg
gcgctaaagggcatcagcgaaggcgcggaaatcacctttaccgattccggttgggcaggc
gatggtttccgttccagtgaaggcgccgttaagtggacagcgcctgaaggcggcgtatct
gcaggcacagttgttacttacactgcagattcttcgcaattcaccactgctaacagcagc
gaagtgggtaataacggcttcaacctttcggtcagtggtgaccaagtactggctttcgtc
ggtgaggctagcgacccaacgtttatctacgcggctcaaaccaacagcaatgagtggcag
gacaccgcagactcctccaacaactccgcccttcctcctggcctcgaagagggtgtaaca
gcggttgctgttggcagtgcccgcaatgccgcctttagcggcgatggcttcggcacagca
gatgagctattaagcgcaattggcaacccggcaaattggtcttttgagcaagatatgctg
cctaccaatgccaccactgactttcatgtaggcacgatggaagccatttatgtacctggc
gagcgcgatattggtttggccattactgagatatggtcaggccagagtggaaccgacatc
accgaagactggttcgaaattaccaaccgctctaacgaaacgttggacttttccgctcag
tcactttattacgacgatgacagcgccgaccccgtggatgccgtcgaaattcaaggatta
acatcacttgccccaggggaatcggccattgtcatggtggatggcaacgccgaatctgtc
gcagagttccgcgcagcgtggagcaacttaccaaatatcgatagtctaaaaattggctat
gccgaggacgcttcaggcctgggtggtggtggcgatgccgtaaccctatggcaaggcgac
ccgcgtgttgacggcaaccaagtggcgatggaagcttatccagataccgatggatttgac
gctgcttcatgggatgtagatctacaggcatttacgaccactcagagtaacggggcagtc
agctccgatgccctgggtggtaaaaatgacgatgtacccgccgtcgcgtcaccgggcctg
gctaatgagcctcaggtcgatattacgctgatctctgcggtgcagggcgagggcgatgtc
agccctctgctagatgaagaagtgacgcttgaagccatcgtcaccatggtaacccctggt
ttggacggctttttcctgcaagaggaagatagcgataacgacgataatgcagaaacatca
gaaggtatattcgtctacgcgggcagcggcagtggtgagtggttggatcagctcgctgcc
ggtgatcagattcgcatcagtggtaaggtctcagagtatttcgagaagacccagctaacc
gccgaacgcaatagtctggaggttctggacaacaacctgcccttgcccgaaagccagcgt
atcatcatgccgtttaccgacaaacaaggcctggaagcctttgaaggtatgcgggtcgcc
atagaagcgctggagggtgagccattggtcgttaccgagctttacgagctgggccgttat
ggcgaagtcacgctttcatcaggaggccgcttagaacagttcacggaagtcaatgcacct
gacgtagaagcttatagcgcctggcttgaagatgccgaggcacgtaccatcaaaatcgat
gacgcgaactcctcacaaaaccccgacccgattatctatgggcgcaatggtgaagagctt
tcagccactaacccactgcgtggtggcgatgagctgcaagtactcgaaggggtacttgat
tacaacttcgaggagtggaaagtccaaaacgtcgaaggtctggactttaccggcccagcg
cgcccggaaacacctgatacagatgccctgggtgacgccgatattacggccgcatcgttc
aatgttctgaactacttcactacgctgaatgagaacggcaagaaaacagagaccttaaat
ggcactctgcatgatcctcgcggggccaataatgctgaagagtttgcccgtcaggaagcc
aaaatcgttgaggccattaataccagcggtgctgatgtggtggggctcatggaaatcgag
aacaacggctatggtgacgatagcgccattgcaacgttggttgatgcgctgaatgcagat
gtgcaggataaaaacattcagggtgtcacttgggcttttaccgtccctgaagatggggat
ggcaacaccactagccctggtgatgatgccattgcggttggggtcatctacaacagccag
gcggtgacacctaacggcgctgcagccactaaaaccgatggggctttcactactgcaaac
cgtgcaccggtgatgcaaacctttgtggatggcaatggggaggaattctctgtcgtcgta
aaccattttaaatccaaaggcagtgtggttaacggcgaagatgccattggcgatggccag
gcgaataataatcctacccgcgttaaggccgcagaggagctgctcgaatggcttggcacc
aagcccaccggtagcgatgacagcgacgtgctgattctgggcgacttgaatgcttatgcc
atggaagaccccatcacgacactgaagaatgctggctatgatctgcttgacgatgactat
agctacgtctttgatggcttctggggctctttggatcatgcgttagccagtgaatctctg
gcaggccaagtcacaggaaccacgacctggcacatcaatgcggatgaggcatcggcgttg
gactacaacaccgacttcactaatgatcgtcaggatgacaatctatacgccgacgacgcg
ttccgtagttcagaccatgaccctatcttagtaggtctgaacttaggcctcgctgaagcc
taa
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