Halomonas sp. BDJS001: OM794_06950
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Entry
OM794_06950 CDS
T10426
Name
(GenBank) RNA-binding transcriptional accessory protein
KO
K06959
protein Tex
Organism
habd Halomonas sp. BDJS001
Brite
KEGG Orthology (KO) [BR:
habd00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
OM794_06950
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
HHH_7
YqgF
T2SSK
S1_RRP5
HHH_6
SAS-6_C_CC_2
Motif
Other DBs
NCBI-ProteinID:
UZH11474
UniProt:
A0A9E8D9C2
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Position
1531240..1533597
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AA seq
785 aa
AA seq
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MDVNQRIISRLATELGVRPEQVSATVELLDGGATVPFIARYRKEVTGALDDIQLRQLDER
LRYLRELEERRAAVLAAIDEQGKLDATLKASIDAAETKQRLEDLYLPFKKKRRTKAQIAR
EAGLEPLADALLADPTLNPESEAENYLRPAEGDIPAIEDAKAALDGAKQILMERFAEDPE
LIGQLRERLWQEGELSARVLEGKQQEGAKFSDYFEHDEKLAKAPSHRALAMFRARNEGVL
SLSIRLPGEEEAPVHPAQVAIAKQFGISDQGRPADKWLAEVVRWTWRVKLYTALETELLG
RLREQAELTAIEVFAANLKDLLLAAPAGQKVTMAIDPGQRTGCKVAVIDATGQFVDHTTI
YPHAPQNQWNEALSVLAKLVKQHGVELIAVGNGTASRETDKLAGELLKALAPAHRLSKVM
VSEAGASVYSASEYASREMPDLDVTVRGAVSIGRRLQDPLAELVKIEPKSIGVGQYQHDV
SQVQLSRSLEVVIEDCVNAVGVDLNTASSALLSRVAGLSTALAENIVAQRNLKGAFKSRK
ELLEVSRLGAKTFEQCAGFLRIHNADNPLDASAVHPEAYPLVERIAKQSGREVRGLIGDS
AALKALKPADFADERFGVPTVNDILKELDKPGRDPRPEFKAAEFREGVETLNDLKLSMVL
EGTVTNVTHFGAFVDIGVHQDGLVHISALSDRFIDDPRSVVKAGDIVTVKVMSIDIPRKR
VGLSMRLDDQPEAENGANKHSGSPKDQHNGARKPARNQRSNANKAEAPEPMGALGAALLK
ARGGK
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atggatgtcaatcagcgtattatttcccgcctagccactgagctaggcgtacgacccgag
caagtatccgctacagtggagctactggacggtggcgccaccgtgccgttcattgcccgc
taccgtaaagaagtcaccggcgcgctggacgatatccagctgcgccagctcgatgaacgc
ctgcgctacctgcgtgagttggaagagcgccgcgcagcggtactcgctgccattgatgag
cagggcaagctcgatgctacgctgaaagccagcattgacgccgccgagaccaagcagcgg
ttggaagatttatacctgccgtttaagaaaaaacgccgcaccaaagcgcaaattgcccgc
gaagcagggcttgagccgctggcggatgcgctgcttgctgatccaacgcttaatccggaa
agcgaagcggaaaactatctgcgcccagcagaaggcgatatccccgccatcgaagatgcc
aaagccgccctggatggcgccaagcagatcctgatggagcgcttcgccgaagacccagaa
ctgattggtcagttacgtgaacgcctctggcaagagggcgaactaagcgcccgcgtgctg
gagggcaagcagcaggagggcgctaagttctccgactactttgaacacgatgaaaagctc
gccaaagcgccgtcacaccgcgcgctggccatgtttagggcgcgtaacgaaggtgtgctg
agtctgtccattcgcctacccggcgaagaagaagcccccgtccatcctgctcaagtcgcg
attgccaagcagtttggtatcagtgatcagggtcgtccggcagataaatggttagccgaa
gtcgtccgctggacttggcgtgtgaagctctacaccgccctggaaaccgagctgctgggg
cgcctgcgggaacaggccgaattgaccgcgatagaggtgtttgcggccaacctaaaagac
ctgctgctggcggcaccggcggggcaaaaagtcactatggccatcgaccccggccagcgt
actggctgcaaggttgcggtgattgatgccaccggccaatttgtcgatcacaccactatc
tatccccatgcgccgcaaaaccagtggaatgaagccctgagtgtgttggctaagctggta
aaacagcacggtgtagagctgattgcggtgggcaacggcaccgccagtcgcgaaaccgat
aagctggcgggtgaactgctcaaagcactggctcccgcacaccgcttaagcaaagtgatg
gtctctgaggcgggcgcttcggtctactccgcctctgagtacgcctcacgggaaatgccc
gatttagatgtcaccgtacgtggcgcggtctccatcggccgccgcctgcaggatccgctg
gccgagctggtgaaaatcgagcccaagtcgattggtgtgggccagtaccagcacgatgtc
tcccaggtgcagctctcccgcagcctggaagtggtaatagaggactgtgtaaacgccgta
ggcgtcgatctcaataccgcctccagcgcactgctttcacgagtggctggccttagcacg
gccttggcggaaaatatcgttgcccagcgcaacctcaaaggcgcctttaaaagccgtaaa
gagctgttagaagtgagccgtctaggggctaaaacctttgagcagtgcgcgggcttcctg
cgtatccacaatgctgacaaccctttggatgccagcgccgtgcacccggaagcctacccg
ctggtagagcgcatcgccaaacagagtggccgtgaggtacgtggcctgattggtgatagc
gccgcactcaaagcgttaaaacctgccgatttcgccgatgagcgcttcggcgtacccacg
gtgaacgatatcctcaaagagctggataagccgggccgcgaccctcggcctgagtttaaa
gcggccgaatttcgtgaaggtgtcgaaacccttaatgatctcaagctttccatggtgctc
gaaggcacagtcaccaacgtgacccacttcggcgcttttgtggatatcggcgttcatcag
gatggcctggtacatatctcggcgttatctgatcgctttattgacgacccccgcagcgtg
gtgaaggcaggtgatatcgtcaccgttaaagtgatgagcattgatatcccccgcaaacgg
gtaggtctatcgatgcgcttggatgaccagcctgaggctgaaaacggcgccaataagcac
agtggctcgcctaaagatcaacacaatggtgcccgtaaaccggctcggaaccagcgcagc
aacgccaataaagcggaagcgccggagcctatgggtgcgctgggcgccgcgttgttgaaa
gcgcgtggcggcaaatag
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