Halomonas sp. BDJS001: OM794_08040
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Entry
OM794_08040 CDS
T10426
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
habd Halomonas sp. BDJS001
Pathway
habd03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
habd00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
OM794_08040 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
habd03019
]
OM794_08040 (orn)
03009 Ribosome biogenesis [BR:
habd03009
]
OM794_08040 (orn)
Messenger RNA biogenesis [BR:
habd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
OM794_08040 (orn)
Ribosome biogenesis [BR:
habd03009
]
Eukaryotic type
Pre-60S particles
RNases
OM794_08040 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
UZH11678
LinkDB
All DBs
Position
1781804..1782409
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AA seq
201 aa
AA seq
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MSNETTGTAEGKTAPRDDLLVWIDLEMTGLDPNKERIIEVATLITDADLNVVAEGPVIAV
KQPDSLLAQMDDWNQKTHGESGLVARVKASKVETTEAEQQTLAFLQQYAVAGSSPMCGNS
IHQDRRFLEREMPALLNFFHYRNLDVSTIKEVAKRWNPGALAGFSKQNVHLAMDDIKESI
AELAHYRNTFLRVDQSRDEEE
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacgaaacaacgggtacagcggaaggtaaaacggcgccgcgggatgatctgctg
gtgtggattgatctagagatgaccggcctggatcctaataaagagcgcattattgaagta
gccacgctcattacagatgcggatttgaatgtggtcgccgaggggccggtgattgcagtg
aaacagccggatagcctgctggcgcagatggatgactggaatcagaaaacccacggcgaa
tcaggtttggtagcacgggtaaaagccagcaaggtggaaacgacagaagctgagcagcaa
accctggcgtttttgcagcagtacgcggtggctgggtcgtcgcccatgtgtggcaacagt
atccaccaggatcgacgctttctggagcgtgagatgcctgcgttgctcaactttttccac
taccgcaatcttgatgtgtctaccataaaagaagtggccaaacgctggaatcccggtgcg
ctggcaggctttagtaaacagaatgtgcacttggcaatggacgatattaaagagtcgatt
gctgaactggcccactatcgcaatacgtttttacgtgttgaccaaagccgcgacgaagaa
gagtga
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