Halomonas sp. BDJS001: OM794_11375
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Entry
OM794_11375 CDS
T10426
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
habd Halomonas sp. BDJS001
Pathway
habd03030
DNA replication
habd03430
Mismatch repair
habd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
habd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OM794_11375 (dnaQ)
03430 Mismatch repair
OM794_11375 (dnaQ)
03440 Homologous recombination
OM794_11375 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
habd03032
]
OM794_11375 (dnaQ)
03400 DNA repair and recombination proteins [BR:
habd03400
]
OM794_11375 (dnaQ)
Enzymes [BR:
habd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OM794_11375 (dnaQ)
DNA replication proteins [BR:
habd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OM794_11375 (dnaQ)
DNA repair and recombination proteins [BR:
habd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OM794_11375 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
vATP-synt_AC39
Motif
Other DBs
NCBI-ProteinID:
UZH12288
LinkDB
All DBs
Position
complement(2454575..2455312)
Genome browser
AA seq
245 aa
AA seq
DB search
MRQVILDTETTGIDPKEGHRLVEIGAIEMVNRRFTGRTYHQYINPERHIDAEVVEVHGID
DARVANEPVFAAIADEFWAFIEGAELVIHNAPFDVGFIDHELSMLNQQRKSPVLGPVRDH
CGVLDTLTMARKMHPGQRNSLDALCKRYDIDNGHRVLHGALLDSEILAEVYLAMTGGQTA
LTLDAATAAEQEQADTSNEGMSIQRLSLTPGQLRVVRPTDAERAAHKAKCEAHQLNWFAG
AASDA
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcaggtgatcttggatacggaaaccacgggcatcgacccaaaagagggacatcgg
ctggtcgaaattggtgctatcgagatggtcaatcgccgcttcactggtcgcacttatcac
caatacatcaacccagagcggcatatcgacgctgaagtcgtcgaagttcacgggattgat
gacgccagagttgctaacgagccggtattcgcggccattgccgatgagttttgggcattt
atcgaaggtgcagagcttgtgattcataacgccccttttgatgtgggctttattgatcat
gagctgagcatgttgaaccagcagcgaaaatcccctgtattggggccagttagagatcat
tgcggcgtattggatacgctgaccatggcgcgcaagatgcaccccggccaacgcaacagc
ctggatgccttatgcaagcgctatgatatcgacaacggccaccgggtattgcacggtgca
ctgttagactcggagatcctggccgaggtctacctggcgatgaccggggggcaaaccgcg
ctgaccttggacgcggccaccgcagcggagcaggagcaggcggatacctccaatgagggg
atgtcaattcagcgtctctctttaacgcccggccagctgcgcgtggtgcgcccaaccgac
gcagaacgcgccgcccataaggccaagtgcgaagcgcatcaattgaactggtttgcaggt
gcggccagcgatgcttag
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