Halomonas sp. BDJS001: OM794_12015
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Entry
OM794_12015 CDS
T10426
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
habd Halomonas sp. BDJS001
Pathway
habd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
habd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
OM794_12015 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
habd03400
]
OM794_12015 (ung)
Enzymes [BR:
habd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
OM794_12015 (ung)
DNA repair and recombination proteins [BR:
habd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
OM794_12015 (ung)
Prokaryotic type
OM794_12015 (ung)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
DUF294
Motif
Other DBs
NCBI-ProteinID:
UZH08133
LinkDB
All DBs
Position
complement(2599258..2599941)
Genome browser
AA seq
227 aa
AA seq
DB search
MANPLPDDWNQWLGNEFQADYMLGLKAFLAEQKAAKKIIYPHSSHWFRAFELTPLSEVKV
VILGQDPYHGPNQAHGLCFSVQPGVPVPPSLVNIYKELASDVGFTPVRHGHLEAWARQGV
LLLNTSLTVEQGNAASHRGKGWEPFTDRAIETVSQHAPPCVFLLWGSHARQKKALIDQRR
HLILEAPHPSPLSAHRGFFGTRHFSQANQFLQAQGRDPIEWQLPETP
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atggctaatccgcttcccgacgactggaatcagtggctgggtaatgaatttcaggctgac
tacatgctggggctaaaagcgttcttggctgagcaaaaagcggccaaaaaaattatttat
ccccactcctcacactggtttcgcgcctttgagctgaccccgttgagcgaagtgaaggtg
gttattttaggccaggatccctaccacggccctaatcaggctcatggcttatgtttttcc
gtgcaacccggcgtcccggtgccgccgtcgctagtcaatatctataaagagctggccagc
gatgtcggttttacccccgtgcgccatggccatctggaagcatgggcgaggcagggcgta
ctgttgttaaatacctcgcttaccgtggagcagggcaatgcggcctcgcaccgcggtaaa
gggtgggagcccttcactgaccgcgcgattgaaaccgtcagccagcacgcgccgccgtgt
gtatttctgctgtggggcagtcatgcgcgccagaagaaggcgttaatcgaccagaggcgc
catttaatactggaagccccgcatccatcaccgctctctgcgcatcggggcttttttggt
acccggcatttttcccaagccaatcaatttctacaagcgcaaggacgagaccccatcgag
tggcaattgcctgaaaccccttaa
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