Halomonas sp. BDJS001: OM794_12690
Help
Entry
OM794_12690 CDS
T10426
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
habd Halomonas sp. BDJS001
Pathway
habd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
habd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
OM794_12690
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
habd02000
]
OM794_12690
Transporters [BR:
habd02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
OM794_12690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_6
SBP_bac_11
SBP_bac_1
DUF5086
Terminase_6C
Motif
Other DBs
NCBI-ProteinID:
UZH08258
LinkDB
All DBs
Position
2740315..2741331
Genome browser
AA seq
338 aa
AA seq
DB search
MNLKRLYQAVLATAVISTSGSVLAQSSDNAICYNCPPEWADWGTQLRLIEQETGIRVPQD
NKNSGQSLAQLVAEADSPVADVVYYGVTFGIQAMEEGVVTPYQPAHWEEIPEGLKDPEGN
WFAIHSGTLGFMVNVDALDGAPVPTSWEDLLKPEYRGMVGYLDPASAFVGYVGAVAVNLA
MGGDLNDFTPAIDYFNQLAENDPIVPKQTSYARVLSGEIPILLDYDFNAYRARHSDGANV
EFVIPAEGSVVVPYVMSLVKDGPNPENGQQVLDFVLSDQGQAVWADAYLRPVRASAISPE
AREVFLPDSEYARAEAVDYNAMAAAQRSFSERYLSEVR
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgaaccttaagcgtctttaccaagcagtattggccacggcagtcatcagcacatcggga
agtgttttggcgcaatcaagcgacaacgcgatctgctacaactgcccaccagagtgggct
gactggggcactcagctgcgtttgattgagcaggagactggcattcgagtgccccaagac
aacaaaaactccggccagtcattagcccaactggtcgccgaagcggatagcccggtggcg
gatgtcgtctactacggggtgaccttcggcattcaggccatggaagagggtgtggtaacg
ccctaccagcctgcccactgggaggagatccccgaaggcttgaaagatcccgaaggcaac
tggtttgccattcactccggcacgctcggttttatggttaacgtcgatgccctggatggc
gcgccggtgcccacttcctgggaagatctgctcaagcccgagtatcgcggcatggtgggc
taccttgaccccgccagcgcctttgtcggttacgttggtgctgtggcggtcaacctagcc
atgggtggcgatcttaatgacttcaccccggcgatcgactacttcaaccagctcgccgaa
aacgacccgattgtgcccaagcaaaccagctacgctcgagtactttctggtgagatcccg
attctcctcgattacgacttcaacgcttaccgcgcacgccatagcgatggtgccaatgta
gagtttgtgattcccgcagagggcagcgtagtagtgccttatgtgatgagcctggtaaaa
gatggccctaaccccgaaaacggtcagcaagtgcttgatttcgtgctctctgatcaaggc
caggcggtatgggcagatgcttacctgcgccccgtgcgcgccagcgccatttcccctgaa
gcgcgcgaagtctttctgcccgatagcgagtatgcccgcgccgaagccgtcgactacaac
gccatggcggctgcccagcgtagcttctctgagcggtatctgtcggaggttcgttaa
DBGET
integrated database retrieval system
