Halomonas sp. BDJS001: OM794_12705
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Entry
OM794_12705 CDS
T10426
Name
(GenBank) ATP-binding cassette domain-containing protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
habd Halomonas sp. BDJS001
Pathway
habd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
habd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
OM794_12705
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
habd02000
]
OM794_12705
Transporters [BR:
habd02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
OM794_12705
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
Metallophos
AAA_21
TOBE_2
Metallophos_2
Rad17
SMC_N
ORC-CDC6-like
AAA
AAA_22
AAA_16
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
UZH08261
LinkDB
All DBs
Position
2743060..2745000
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AA seq
646 aa
AA seq
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MSSSVSITLNQCSRTFADGTTALQPLDLQVNAGETLVLLGPSGCGKTTTLRIISGLESPD
KGGQVLFGERDVTALPIEKRDVGMVFQNYALFPNMSVADNIAYGLKIQRLPRAEISQRLD
EVMHMVDLQGFGERRIDALSGGQKQRVALARAIAVRPKVLLFDEPLAALDAKLRDRLRIE
IGQLLRELGTTAVYVTHDQDEAMALGDRIAVMQAGRIAQLGTPQEIYHQPANAFVADFIG
AVNCLDIIGSQKEGRLLVHGGELSASHLQGVPTVYCRPEDIQVVPLDQADVTGTVVQSIF
LGQSQRLMVDTGGASPLQIEAPSRQRCQTVPPLVCPSLLTCFFIQISPLPLLMPRRWPMA
DQGLNIQKDPHAQQCLIAQISDPHIKAGGKLSYRQVDTASALRKAISKLNQLAPRPDLVL
ISGDLVDFGHPDEYATFKQLLADLTLPVYLIPGNHDDRQHLRHAFPEHRYLFQHRDYLQW
VVDDYPVRLIGLDSSVPDKPHGKLSDESLEWLDTTLTEQPDKPTLVMVHHHPFVSGIDHM
DRQPLKRPEALADVIGKHPQIERVLCGHLHRSIQARFANTLVISCPGVSHQVSLDLTPDG
PAHFQLEPPGYLLHQWSAANGMVTHQGFIDPYSGPFPFYDANGLID
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgagttcatctgtcagcattaccctaaaccagtgcagccgcacctttgcggatggcact
accgcgctacagccgcttgatttacaggttaacgcgggcgaaacccttgtactgctgggc
ccttccggctgcggtaaaaccaccaccctgcgcattattagcggtctggaaagccccgac
aaaggcgggcaggtgctgtttggcgagcgtgatgtcaccgctctgccgattgagaagcgc
gacgtgggcatggtgtttcaaaactacgcgctatttcccaatatgagcgttgctgacaac
attgcctacgggctaaaaatacagcgtttgccacgagctgagatttcccaaaggcttgac
gaagtgatgcatatggtcgacttgcagggctttggtgagcggagaatcgacgctctctcc
ggcggccaaaaacagcgcgtggcgcttgcccgggcgattgctgttcgccccaaggtactg
ctgtttgatgagccgttggcagctctagacgcgaaactgcgcgaccgcttacgcatcgag
attggccagcttctacgggagctaggcaccacggcggtctacgtcacccacgaccaggac
gaggccatggccctgggtgaccgcatcgcggtgatgcaagccgggcgcattgcccagtta
ggcacgcctcaagagatttatcaccagcccgccaatgcctttgtggccgattttattggc
gcggttaactgcctggacattatcggcagccaaaaagagggaagattgttggtacatggc
ggtgagctctctgcctctcacttgcagggcgtacccacggtctactgccgaccagaagat
attcaggtagtgccacttgaccaagccgatgtaacaggcacggtagtgcaaagcattttc
ctgggtcagagccaacgcctgatggtggatacgggcggcgcttcgccactccagattgag
gcaccctctcgccagcgctgccaaacggtaccgccattggtttgtccctcccttctaacg
tgctttttcatccagataagcccactgcccctgttaatgccaaggagatggccaatggct
gatcaaggtttgaatattcagaaagatcctcatgcccagcaatgccttatcgcccagatt
agcgatccgcatatcaaggcgggcggcaagctctcctaccgccaagtggataccgctagt
gctttacgcaaagcgatcagcaagctcaaccagctagcaccgcggcccgacctggtgctg
attagcggtgacttggttgattttggccaccccgacgagtacgccacctttaagcaactc
ctggccgacctgacgcttccggtgtacttgatccctggcaatcacgacgaccgccaacat
ctgcgtcatgcattcccggagcatcgctacctgtttcagcaccgcgactacctgcagtgg
gtcgtggatgactacccggtacgcctcataggtctcgactcatcggtgccggacaaacct
catgggaagctaagcgatgagagcctggagtggttggatacaacgctgacggagcagccc
gataaaccgacgctggtcatggtgcatcaccacccgttcgtgagtggtatcgaccatatg
gatcgccagccgctgaagcgaccagaggcgctcgccgacgtcattggcaagcacccccag
atcgagcgggtgctctgcgggcatctgcaccgctcgattcaggcgcgctttgccaacact
ctggtgataagctgccccggggtttcccaccaggtcagcctggatctcactccagacggc
cccgcccactttcagctagagccacccggttacctgctacaccagtggtcggcggctaat
ggcatggtgactcaccaagggtttatcgacccctactccggcccgttcccgttttatgat
gccaatgggctaattgattaa
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