Halomonas sp. BDJS001: OM794_13500
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Entry
OM794_13500 CDS
T10426
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
habd Halomonas sp. BDJS001
Pathway
habd00071
Fatty acid degradation
habd00280
Valine, leucine and isoleucine degradation
habd00310
Lysine degradation
habd00362
Benzoate degradation
habd00380
Tryptophan metabolism
habd00410
beta-Alanine metabolism
habd00640
Propanoate metabolism
habd00650
Butanoate metabolism
habd00907
Pinene, camphor and geraniol degradation
habd00930
Caprolactam degradation
habd01100
Metabolic pathways
habd01110
Biosynthesis of secondary metabolites
habd01120
Microbial metabolism in diverse environments
habd01200
Carbon metabolism
habd01212
Fatty acid metabolism
Module
habd_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
habd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
OM794_13500 (fadB)
00650 Butanoate metabolism
OM794_13500 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
OM794_13500 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
OM794_13500 (fadB)
00310 Lysine degradation
OM794_13500 (fadB)
00380 Tryptophan metabolism
OM794_13500 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
OM794_13500 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
OM794_13500 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
OM794_13500 (fadB)
00930 Caprolactam degradation
OM794_13500 (fadB)
Enzymes [BR:
habd01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
OM794_13500 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
OM794_13500 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
OM794_13500 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
OM794_13500 (fadB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Rax2
Motif
Other DBs
NCBI-ProteinID:
UZH08407
LinkDB
All DBs
Position
complement(2902950..2905142)
Genome browser
AA seq
730 aa
AA seq
DB search
MIYQGNAITVTRRDTPSGNNIAMLTFDLKDESVNKLSSAVVAELSEAVKAIQAENSLKGL
LIASGKDVFIVGADITEFHSLFDKGEAYLEEMNLKVHAIFNAIEDLPFPTVTAINGLALG
GGCEVLLTTDFRVMGEKAKIGLPETKLGILPGWGGCVRLPRIIGADNAIEWIAGGTENRA
DAALKVGAVDAVVAAEQLEEAALDILDRANAGELDYQARRDEKTSPLKLNPIEQMMAFET
AKGYVAGKAGPHYPAPVEAIKVIQKGAGEERGRAQAIEAKAFAKLALSSVAFNLVGLFLN
DQVVKKKASKYEKQAQPVKQTAVLGAGIMGGGIAYQSASKGTPILMKDIKDDAIELGLKE
ARKLFAKQVERKKLTTEQMAEKLSNIRPTLSYGDFGSVDLVVEAVVENPKVKDAVLTEVE
GMVSENTILTSNTSTISINRLAQNLKRPENFCGMHFFNPVHRMPLVEVIRGEKTSDAAVG
ATVAYARAMGKTPIVVNDCPGFLVNRVLFPYFGGFSFLIEQGADFQHVDKVMEKFGWPMG
PAYLLDVVGLDTAVHANEVMAEGFPDRMAREGKTAIQVMYDNDRLGQKNDKGFYAYEEDK
KGKPKKVTDEAAYALVKEVVKEHKEFSDEDIIARMMVPLCLETVRCLEDGIVATPAEADM
ALIYGIGFPPFRGGALRYIDAMGVAEFVKLAEGLADELGPLYAPTDKLRQMAQNNEQFYS
SGNSASASQD
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgatctatcaaggcaatgccatcacggtgacacgtcgtgacaccccgagtggcaacaat
atcgcaatgctcactttcgatctgaaagatgagtccgtcaacaagctttccagcgcggtg
gtcgcagagctgagcgaagcagtaaaagccattcaagctgaaaatagcttaaaaggttta
ctcattgcgagcgggaaagatgtgtttatcgtgggcgccgatatcaccgagtttcacagc
ctatttgataaaggcgaagcctaccttgaggagatgaatcttaaggttcacgccattttt
aacgctattgaagatctgccgttccctaccgtaacggcgatcaatggtctggcgctgggt
ggtggctgcgaagtattgttgaccactgattttcgcgtgatgggtgaaaaagccaaaatc
ggtcttccggaaaccaagctcggcatcctgcccggttggggcggctgcgtgcgcctgccg
cgcattattggcgccgataacgccatcgagtggattgccggtggtaccgaaaatcgtgcc
gatgccgcgctaaaagtaggcgccgttgacgcggtggtggcggcagagcagttggaagaa
gccgcgttggacattcttgaccgtgccaacgccggtgagctggattaccaggcccgtcgc
gatgaaaagaccagcccgctgaagcttaaccccattgagcagatgatggcgtttgaaaca
gcgaaaggctatgtcgccggtaaagcgggcccccattacccggcgccggtagaagcgatt
aaagtgattcagaaaggcgcgggcgaagagcgtggccgtgcccaggccattgaagccaaa
gcctttgccaagctggcgctcagcagcgtggcgtttaacttggtgggtctgttcttgaac
gaccaagtggtcaagaaaaaagccagcaagtatgagaagcaggcgcagcccgttaagcaa
acggccgtgctgggtgcgggcattatgggcggcggtatcgcttatcagagtgcctctaaa
ggcacgccgattctgatgaaagatatcaaggatgacgccattgaactgggcctgaaagaa
gcccgtaagctatttgccaaacaggtcgagcgcaaaaaactgaccaccgagcagatggcg
gagaagctgagcaatattcgtcccacgctctcctacggtgattttggcagcgtcgatctg
gtcgtcgaagcggtggttgaaaaccccaaagtcaaagatgccgtcctcaccgaagtggaa
ggcatggtgagcgaaaacactatcctcacttctaacacatcaacgatttccatcaaccgt
ttggcgcaaaacctaaagcggcctgaaaacttctgcggcatgcacttttttaaccccgtg
catcgtatgccgttggtggaagtcatccgtggcgagaaaacctcagacgccgcggttggc
gctactgtggcctacgcccgggcaatgggtaaaacaccgattgtggtcaatgattgcccc
ggcttcttggtcaaccgcgtgctcttcccttactttggcggcttcagcttcttaatcgag
caaggcgctgacttccagcacgttgataaagtgatggagaagttcggctggcccatgggc
ccggcctacttgctggatgtggtcggcctggacactgcggttcacgccaatgaagtaatg
gcggaaggcttccctgatcgtatggcccgcgagggtaaaacggccattcaggtcatgtac
gacaatgaccgtttaggccagaagaacgacaagggcttctacgcttacgaagaggacaaa
aagggtaagccgaagaaagtcaccgacgaagccgcttacgccttggtcaaagaggtggtg
aaagagcataaagagttttccgacgaggatattatcgcccgcatgatggtgccgctctgt
ttggaaaccgtgcgctgtttggaagatggcatcgtagccacgcccgccgaagccgatatg
gcgttgatctatggcatcggcttcccgccgttccgcggtggtgcgctgcgctacatcgac
gccatgggcgttgcagagttcgtcaagctggcagaaggcttggccgacgagctggggccg
ctttatgcacccactgacaagctacgtcagatggctcagaacaacgagcagttctactcc
agcggcaactctgccagcgcaagccaagactaa
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