Halomonas sp. BDJS001: OM794_13575
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Entry
OM794_13575 CDS
T10426
Name
(GenBank) MATE family efflux transporter
KO
K26939
MATE family, multidrug efflux pump
Organism
habd Halomonas sp. BDJS001
Brite
KEGG Orthology (KO) [BR:
habd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
habd02000
]
OM794_13575
Transporters [BR:
habd02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
OM794_13575
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Gene cluster
GFIT
Motif
Pfam:
MatE
TPR_Sec16
Motif
Other DBs
NCBI-ProteinID:
UZH08421
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All DBs
Position
2920810..2922228
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AA seq
472 aa
AA seq
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MGGFTQNVRSVYWPETRALIFLALPICGAQLAQAGMSVVDVMMTGRHNATSLAAVSVGSS
LWMPLMLFMTGTLMGLTPIVAHLLGGQRNTAIRPAVHQALWVALVLGAVAAVLLWSAIMP
IFELMSVPPAVASQSAAYLSAIAFGMPGIALFQALRAFSDGMNHTRPALWISLVGLSVNI
PANYLLIYGGDGLVDLFGPVVPTSLQQLPALGAFGCGIATALSMWTMALAMAYYTRRGST
YKSVAIWHKLTPPQWLGIRELVVVGVPIGVAIFVEVTLFTLIALFIASFGEVTVGAHQIA
LSFTSILFMLPLSLSMALTVRVGNTLGQQRLAHARKVAWNGIVISVIVAAINSVLLWVSA
VPVIALYTSNSEIQALALSIIALAVIFQLSDSLQVNLAGALRGYKDTRIVMVITVLSYWF
VGLGGGHWLGSHGVGDMVAPLGVHGYWIGLIAGLSTAALLLGWRLQRISIRG
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
gtgggcggttttactcaaaacgttagatcagtgtactggccagaaacccgagccttaatc
tttttggcactgcctatttgtggtgcccagctggctcaggcggggatgagcgttgtcgat
gtgatgatgaccggccgacataatgccacgtcccttgccgccgtatcggtgggttcgagt
ctatggatgccgctcatgctctttatgaccggcactttgatggggctgacacccatagtg
gctcatttgctaggcgggcagcgcaatacggctatccgcccggccgtccaccaggcgctg
tgggtcgcgctagtgctaggcgccgtagctgcagtgctgctttggtcggccatcatgccg
atatttgaattgatgagcgtgccaccagcggtcgccagccaatctgccgcctatttgtca
gccatcgcttttggcatgccggggatcgccctctttcaggcgcttagagcgttctccgat
ggcatgaatcatacccgcccggcgctatggatcagcttggtcggtttaagcgtgaatatt
cctgccaactacctcttgatctacggcggtgatggcttggttgatctatttggccccgtg
gttcccactagtttgcaacagttacctgccttgggcgcttttggctgtggcattgcgacg
gcactctccatgtggacgatggcgctggcgatggcctactacacgcgcagaggaagtact
tataaaagcgttgcgatttggcacaaactgacaccgccccaatggctaggtatacgtgaa
ttagtggtggtgggcgttcccattggcgtggccatttttgttgaagtaaccctgttcacg
ctcattgcactcttcattgccagctttggtgaggtcacggtaggtgcccaccaaatagcg
ctaagtttcacctccattctgtttatgctgcccctgtcgcttagtatggcgctgaccgta
agagtcggtaacaccctcggtcagcaacgcttggcacacgcccgtaaagttgcctggaat
ggtattgttattagtgtcatcgttgcagctattaacagcgtcctgctatgggtaagtgcc
gtaccggtgattgcactttacacctccaatagtgagatacaggcgttagcgctctcgatc
attgccttggccgttattttccaactctccgactcgttacaggtcaatttagcaggcgcc
ttacgcggctataaagatactcgcattgtgatggtgattacggtgctctcgtactggttc
gtagggctcggcggcggccactggctgggctctcatggagtgggtgacatggttgctcca
cttggggtgcatggctactggattggcttgatcgcgggcctaagcactgcggccctacta
cttggctggcgtttacagcgtattagcattcgggggtga
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