Halomonas sp. BDJS001: OM794_14255
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Entry
OM794_14255 CDS
T10426
Name
(GenBank) type I secretion system permease/ATPase
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
habd Halomonas sp. BDJS001
Pathway
habd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
habd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
OM794_14255
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
habd02000
]
OM794_14255
02044 Secretion system [BR:
habd02044
]
OM794_14255
Transporters [BR:
habd02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
OM794_14255
Secretion system [BR:
habd02044
]
Type I secretion system
Adhesin protein transporter
OM794_14255
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
Peptidase_C39
SMC_N
AAA_21
Motif
Other DBs
NCBI-ProteinID:
UZH08537
LinkDB
All DBs
Position
complement(3081448..3083625)
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AA seq
725 aa
AA seq
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MTQTKLERPTAANAGEQPLGDELLECLKAVASFHQHEVSSEALRAGLPLEEGKLTPSVFG
RAASRAGLTSRIVKSKLSVLNPALFPAILLLEPGRACVLLGIDLKQQKANVIFPELSESN
VELPLEELYAGYSGEAIYVRPKFLADNASEPGVKKRRDQHWFWGVIRENRPLYRDIVLGS
VAINVFAIAMPLFVLNVYDRVVPNQATETLWVLAIGIFIVLCFDLVLRLMRSSFVDLAAS
RADVKLSSSIMAKALGLRLEERPASTGSFTSTLQSFESVRAFIGSATILGIVDLPFVLMF
AAIIALISPWLVLPVLVGIVFVLLYALAAQGKLHELSQTTWEVGAQRNSLLVESISQLEN
VKALRAESRIQRHWEKSSAFLSRTGAQLKMVSTSVSNVAQWAQHSVAVCVIIVGVYQIIE
GNLTQGGLIAAYMLSSRAMAPISQAAALLAQYHQSSTALESLNAVMDKKVERHEGKAYVE
KPSFIGNIRLEKVTLRYPNEEREALKDVSITVKAGEKVALLGRIGCGKSSLNKLVLGFYQ
PTSGAVLVDNVDIRQLDPLQLRRHIGYVPQDVSLFSGSLRDNIVAGGGSDRVDDDALLRA
IGLAGLESLVNSHPHGVDLQVGERGQALSGGQKQSVAIARALVQDPPILLLDEPTSSMDN
ASEEAFKANLTNVAAGKTILVVTHRTSLLSLVDRIIVMDAGKVVADGPRDTVVEALRKGQ
IGRAS
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
gtgacacaaaccaagctggaaaggccgaccgctgcaaatgctggcgagcagccattaggc
gatgagttactcgaatgtttgaaagcggttgcctcatttcatcagcacgaggtgtcatca
gaggctcttagagcgggcttacccttggaggagggtaagctgacgccttccgtctttggt
agggccgcttcccgtgccgggctgacgtcgcggattgttaaaagcaagctgtcggtacta
aaccctgcactatttcccgctattctcttgttggagccgggtagggcgtgtgtgctgttg
gggattgatcttaagcagcaaaaagcaaacgtcatctttcctgagctatctgaatcaaac
gttgaactgcctcttgaagagctgtatgcgggctatagcggcgaagctatttatgtccgt
cctaagtttctcgccgataatgcctctgaacctggggtcaagaagcgtcgcgatcagcac
tggttttggggcgttattcgcgaaaacagacctctctatcgcgatatcgtgctcgggtcg
gtggccattaacgtgtttgccatcgccatgccgctgtttgtgcttaacgtctatgaccgg
gtagtgcccaatcaggcaacggaaacgctctgggtgctcgcgataggcatctttattgtg
ctgtgctttgatttagtgctcaggctaatgcgcagcagctttgtcgatttggccgctagc
cgggcggatgtgaagctctcttcttcaatcatggccaaagcattaggtttgcgtttagaa
gagcgtcccgcatcaaccgggtcgtttacctcgacacttcaatcctttgagtcggtacgc
gcctttattggttctgcgactattttggggattgtcgaccttccatttgtactgatgttt
gcggcgattatcgcgctgatcagcccctggctagtgctgccggtattggtgggcattgta
tttgtgctgctttacgccttggccgctcagggtaagcttcatgaactttcccagacaacc
tgggaagtcggtgcccagcgcaactcgctgttggtggagtcgatttcccaattagaaaat
gttaaagcgctgcgggcggagagtcgtattcagcgccactgggaaaaatcatcggccttc
ctttcccgtaccggtgcgcagttaaaaatggtcagcacctctgtctccaatgtggcccag
tgggcgcagcacagcgtggcggtatgcgtcatcattgtcggtgtttatcaaatcatcgaa
ggtaatctcactcagggcggtttgattgccgcctatatgctctcttcacgggcgatggca
cctatcagtcaggcagcggcgctgctggcgcaataccatcaatcctcaacggcgcttgag
tcacttaacgcagtaatggacaaaaaggtagagcgccatgaaggcaaggcctatgtagaa
aagcccagcttcattggcaatattcgtcttgagaaagtgacgcttcgctaccccaatgaa
gagcgtgaagcgctgaaagacgtatcgataacggtcaaagccggtgaaaaagtagccctg
cttggccgcattggttgcggtaaatcttcattaaataaattggtgctggggttttatcag
ccaacgtcgggagcggtgttggttgataacgtggatattcgtcagttagatccactgcag
ttacgccgccatattggctatgttccccaggacgttagcctgttttcagggtcgctgcgg
gacaatattgtcgcgggtggcggtagcgaccgcgttgatgacgacgcgttgctgcgtgcc
attggtttggcgggtttggagtcccttgtcaatagccacccccatggtgtggatctgcaa
gtgggtgagcgaggtcaagcgctttccggtgggcaaaaacagtccgtcgctatcgcccga
gcgctggtacaggatccgcctatcctgctgttggatgagccaacaagctctatggataac
gccagcgaagaggcatttaaagccaacctgaccaacgtggctgcaggaaaaacgattctg
gtggtgacgcaccgcacctcgctcctctcactggtcgaccgaattatcgtcatggatgcc
ggcaaggttgtggctgatgggccgcgggatactgtggtcgaggcattgcgcaaaggccag
atcgggagggcatcgtaa
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