Halomonas sp. BDJS001: OM794_14340
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Entry
OM794_14340 CDS
T10426
Name
(GenBank) lytic murein transglycosylase
KO
K08305
peptidoglycan lytic transglycosylase B [EC:
4.2.2.29
]
Organism
habd Halomonas sp. BDJS001
Brite
KEGG Orthology (KO) [BR:
habd00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
habd01011
]
OM794_14340
Enzymes [BR:
habd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
OM794_14340
Peptidoglycan biosynthesis and degradation proteins [BR:
habd01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
OM794_14340
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Paralog
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Motif
Pfam:
SLT_2
PG_binding_1
PG_binding_2
Glucosaminidase
PG_binding_3
DUF7706
SLT_4
DUF4148
Motif
Other DBs
NCBI-ProteinID:
UZH08553
LinkDB
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Position
complement(3097248..3098516)
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AA seq
422 aa
AA seq
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MPRHFFIGLRCSPLLCASLMAVLSTPFAASVALANPQLMSEVDTQTATEVSYANFQQWLR
DFRQYAAEQGISEATLSNALDSVRYRERVVELDGYQPEFVRPIWEYLDTAVSSTRINNGL
EKLAEHRETAQQMQQRYGVPAEIIVAIWGIESNYGSNFGDFSTLESLATLAYDGRRRDFA
RGELLAALRIIDQGDIAADEMKGSWAGAMGHTQFIPSSFEAYAVDGDGDGRRDIWGSIPD
VMASTANYLDRAGWQANQPWGVEVRLPEGFDYAQTERRSSDEWRSQGVRAQQGELPNFDS
AAIVIPAGADGPAFLVGANFRAILRYNNATSYALAVATLGDAIAGREGIQHSWPREQAPL
TRDDVQELQRALNRAGYSVGGADGVMGPNTRQGLRNFQRDQGVIPDGFATQELLEQLRQR
SQ
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgtcatttctttattgggctgcgttgtagcccgttgctgtgtgcctcattaatg
gccgtgttaagcacgccgtttgcagcaagtgtagcgcttgctaatcctcaactgatgtct
gaagtcgatactcagacggccacggaggtgagctacgctaatttccagcagtggctgcgc
gattttcgccagtatgctgcggaacagggaatcagtgaggcgaccctaagtaacgcgctg
gatagcgttcgctatcgtgaacgggtggttgaacttgacggttaccagccggaatttgtc
cgccctatttgggaatatttggataccgccgtttcatccacgcgtattaataacgggtta
gaaaagctggccgaacaccgcgaaacggcacagcaaatgcagcagcgctatggagtgcca
gccgaaatcattgtcgccatttggggcattgagagcaattacggcagtaattttggcgat
ttttcgaccctggagtcactcgccacgctagcttacgatggtcggcgccgtgactttgcc
cgcggtgaattgctcgcagcgttgcggattattgatcaaggggatattgccgctgatgaa
atgaaaggctcctgggccggggccatgggccatactcagtttattcccagcagcttcgaa
gcctacgcggtagatggcgatggcgatggtcgacgcgatatttggggcagcattcccgat
gtcatggcctcaacggccaactatcttgaccgagctggatggcaggctaaccagccctgg
ggggttgaggtaagactgcctgaagggtttgattacgcccagaccgagcggcgcagcagc
gatgagtggcgcagtcaaggtgtgcgggcgcagcagggtgaattgccgaactttgatagt
gcagccattgtgatacccgctggcgcggatggccccgcctttttggtaggtgccaatttc
cgtgcgatcttacgctataacaatgccaccagttacgcactggccgtcgcaacgttaggc
gatgcgatcgctggacgcgagggcattcagcacagctggccgcgggagcaagcgccgctg
acccgtgacgatgttcaagaacttcagcgcgcattaaaccgtgcaggctactcagtgggt
ggcgctgacggcgttatggggcccaacacgcggcaagggttgcggaactttcagcgtgat
caaggggtaataccggatgggtttgcgacccaggagctgcttgaacagctacgtcagcgt
tcgcagtaa
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