Halomonas sp. BDJS001: OM794_14865
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Entry
OM794_14865 CDS
T10426
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
habd Halomonas sp. BDJS001
Pathway
habd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
habd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
OM794_14865
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
habd02000
]
OM794_14865
Transporters [BR:
habd02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
OM794_14865
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
SMC_N
AAA_29
AAA_25
AAA_16
RsgA_GTPase
nSTAND_NTPase5
DO-GTPase2
AAA_23
NACHT
AAA_22
AAA_28
Motif
Other DBs
NCBI-ProteinID:
UZH08641
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Position
3204593..3205702
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AA seq
369 aa
AA seq
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MDERDSVGVAIRSISKRYGSTVALKDITLNIEPGEFVSLLGPSGSGKTTLLGALGGFVMP
SSGSVWVGDQDMTYMPPHKRNIGIVFQSYALFPHMSVGENVAFPLRARRLPKSTWPERVR
QALAMVELDGYQDRGVSQLSGGQRQRVALARAIVFEPRLILMDEPLSALDKQLRETMQIE
LRRLHRKLGATVVYVTHDQREALTMSDRVAILKDGELVQIGAPETLHNNPKDSFVASFIG
DSTLLPVIRIDEHTVRLGDQTLRSAKPITPHAELLLAIQTEKLLIDDGQHEPGINRLPCR
IMEAVYQGDSLRLFLELEGGISISLRQPSHHAARLQIPPLGERLSVVLHPEDTIIVPRSG
CPTPATNVA
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggatgagcgagacagtgtgggggttgccatacgctccatcagtaagcggtatggcagc
acggtagccctgaaagacataaccttaaatattgagccgggtgaattcgtgtcgttgctg
ggcccttcgggctcgggaaaaacgactttgcttggcgccttgggcgggttcgtcatgccc
tcttcagggtcagtatgggtcggtgatcaggacatgacctacatgccgccgcacaagcgc
aacatcggcatcgtctttcagagttacgctctctttcctcacatgagtgtcggcgaaaac
gtcgcctttcccttgcgggctcgtcgcctccccaagtcaacatggccggagcgggttcgt
caggcgctggccatggtggaactggatggctatcaggataggggtgtatcacaactttca
ggcggccaacggcagcgggtcgctcttgccagagcaatcgtgttcgagccacggctaatc
ctgatggacgaaccgctttcagcgctagataagcagttgcgcgagacgatgcagatagag
ctgcgccgcttgcatcgcaagctgggggctaccgtggtgtatgtgacccacgaccagcgt
gaggcactgaccatgagcgacagggtcgcgatccttaaggatggcgaactggttcagatc
ggcgcccccgaaacgctgcacaacaatcctaaagactcttttgtggccagcttcatcggt
gattccaccctgctcccggtgatccgcatcgatgagcatactgtccggttaggcgatcaa
acactgcgttcggccaagcctatcactcctcatgccgaactactgctggcgattcaaacc
gaaaaactgctgatcgatgacggccagcatgaaccgggcatcaatcgcctgccatgccga
atcatggaggccgtctaccagggcgatagcctgcgattgttcctcgaactggaaggcggc
atctccatcagtctgcgtcaacccagccaccatgccgcaaggctacagattccaccgctc
ggcgagcgcttgagcgtggtactgcatccagaggacaccatcatcgtgcctcgttcggga
tgccccactccggcgaccaacgttgcctga
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