Halomonas sp. BDJS001: OM794_16205
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Entry
OM794_16205 CDS
T10426
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
habd Halomonas sp. BDJS001
Brite
KEGG Orthology (KO) [BR:
habd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
habd03021
]
OM794_16205 (rpoS)
Transcription machinery [BR:
habd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OM794_16205 (rpoS)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
UZH08884
UniProt:
A0A9E8IF97
LinkDB
All DBs
Position
complement(3480566..3481537)
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AA seq
323 aa
AA seq
DB search
MSMLEKDLQEVDLDAAEEALDDTDDVTVEEDAFEKALGREDRQSTQSLDATQIYLNEIGF
SPLLTPEEEVYYGRLARKGDPLGRSRMIESNLRLVVKIARRYLNRGLTLLDLIEEGNLGL
IRAVEKFDPERGFRFSTYATWWIRQTIERALMNQTRTIRLPIHVVKELNIYLRAARELTQ
KFDHEATAEEIADHLDKPVDVVKKMLGLNERVSSVDYPMGGESDKPLIDTLADDEVQGPE
ARLVDGDVKEHVDLWLDELSEKQREVVVRRFGLRGHESATLEEVGAEIGLTRERVRQIQV
EALKKLRRALEKQGLSLEALFET
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgagtatgttggagaaagatctacaggaggttgacctggatgctgctgaggaggcgctt
gatgatactgatgatgtcacggtagaagaagacgctttcgaaaaggcactagggcgcgag
gatcgtcaatcgacccaaagcttggatgcgacgcaaatctacctcaacgaaatcggcttt
tcgccactgttaacgccagaagaagaagtctattacggtcgcttggcccgtaagggtgac
cccttggggcgctcgcggatgattgaatccaacctgcggctggtggtaaagattgcccgt
cgctacctgaaccggggcttgacgctgctggatttgatcgaagagggcaatttaggcttg
attcgcgcggtggagaagttcgaccccgaacggggcttccgtttctcgacctacgcgacc
tggtggattcgtcaaaccatcgaacgggcgctgatgaatcaaacgcgcaccatccgcttg
ccgatccatgtggtcaaagagttgaatatttacctgcgtgcggcgcgggaattaacccaa
aaatttgatcacgaagccaccgctgaagagatcgccgaccatctggataagccggtcgat
gtggtcaaaaagatgctcggacttaatgagcgggtgtcgtcggtggattaccccatgggg
ggcgagagcgataagccactgatcgatacgctggcggatgatgaagtgcagggccctgaa
gcacgcttggtggatggtgacgtcaaagagcatgtggatctatggctggacgagctgagt
gaaaaacagcgcgaagtggtggtgcgccgttttggcttacgcggccatgagtcggccacc
ctcgaagaagtgggcgccgaaattggtttaacccgcgagcgggtgcgccagatccaggtc
gaagcgctcaagaagctgcgccgtgcactggaaaaacagggcctttctttagaggcgctg
tttgaaacctga
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