Halomonas sp. BDJS001: OM794_17335
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Entry
OM794_17335 CDS
T10426
Name
(GenBank) DEAD/DEAH box helicase
KO
K19789
DNA repair protein RadD
Organism
habd Halomonas sp. BDJS001
Brite
KEGG Orthology (KO) [BR:
habd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
habd03400
]
OM794_17335
DNA repair and recombination proteins [BR:
habd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
OM794_17335
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
AAA_22
AAA_30
SLFN-g3_helicase
zf-tcix
AAA_16
SNF2-rel_dom
DZR
Flavi_DEAD
AAA
DUF7577
Motif
Other DBs
NCBI-ProteinID:
UZH09089
UniProt:
A0A9E8D4L1
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Position
complement(3714662..3716464)
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AA seq
600 aa
AA seq
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MLFNLSTPSSSLVTLPTPQLRPYQQEAVKRVVVHFRASSDPALVVLPTGSGKSLVIAELA
RLARGRVLVLAHVRELVEQNHAKYQAYGLEADIFSAGLKRKEASRQVVFGSVQSVVRNLA
SFNDANFTLLVIDESHRISLNEDASYRQVIEHLRQHNPQLKILGLTATPYRLGQGFIYYR
HHHGMVRGSEESFFRDCVFEQPLRLMVKQGYLAEPKRLDMAIEGYDFSALRPSSSGLFQE
QELNRVVAGSRATPGIIGQIVERALERQGVMIFAATVAHAEEIMAYLPREEAALITGATP
SQERTALIDAFKARQLKYLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQMVGRGLRLS
PGKSDCLILDYAGNPWDIFAPEVGEPKPDSDSEPVQVECPACGHANLYWGKRDGDLVIEH
FGRRCQGLIEDDEGKRRQCDFRFRFKVCDECGAENDIAARRCHGCEKLLVDADDKLKDAL
KLKDAKVLRVSGMQLEATTNGRGLPRLKVTYYDEDGTHLAEWFALETPAQRRAFYAAFLR
YHLRAPGGKWQPLSAEEVVAEQRRLRHPDFVVGRKVGRHFQIRDKLFDYAGRYRKAVEAG
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
gtgctatttaatttgtcgacacctagctcctcactagtcaccttaccaacgccccagctt
cgcccttatcagcaggaagcggtcaagcgtgtggtggtgcacttccgtgcctccagcgat
cctgctttggtagtgctgcctaccggtagcgggaaatcgctggtcattgctgagctagcg
cgtttggcgagggggcgggtactggtgctggctcatgtgcgcgagcttgtggagcagaac
cacgccaaataccaagcctatgggcttgaagcggatatttttagcgccggtttaaagcgt
aaggaggccagtcgccaagtagtgtttggctcggtgcagtcggtggtgcgtaacctggcg
agttttaatgatgccaattttaccctactggtgatcgacgaaagccatcgcatatcgctt
aatgaagacgccagctaccgccaagtgatcgagcatttgcgacagcacaatccgcaattg
aagatacttggcttaaccgcgaccccttatcgcttggggcaagggtttatctactatcgc
caccatcacggcatggtgcgaggcagtgaagagagctttttccgcgactgtgtgtttgaa
cagccactccgcctgatggttaagcagggctatctcgctgaacccaagcgtttggatatg
gccattgaaggctacgatttctctgcactgagaccatcatccagcggtctgtttcaggag
caggagctgaatcgcgtggtggcgggcagccgggcgacgccggggattatcgggcaaatc
gtcgagcgtgcgcttgagcgccagggcgtgatgatttttgccgctactgtggcccacgcc
gaggagatcatggcttatctaccaagggaagaggcggcgttaattaccggggcaacgcct
tcccaggagcgtactgcgctgatcgatgcctttaaggcgcggcaactgaaatatctggtc
aacgtggcggtgctgaccaccggtttcgatgcgccccacgtggatttgatcgctattttg
aggcccaccgaatcggtgagcctctatcaacagatggtgggcagagggctgcgcctatca
ccggggaaaagcgactgtctgattctggactatgccggtaacccttgggatatttttgcc
ccagaagttggcgagcccaagccggatagcgacagcgaaccggttcaggtagagtgtccg
gcttgcggtcatgccaatctttactggggtaagcgcgacggtgatttagtgattgagcac
tttggccgtcgctgccaggggctaattgaagatgatgaaggaaagcggcgccaatgcgac
ttcaggttccgtttcaaagtctgcgatgagtgcggtgccgagaatgatattgctgcccgc
cgctgccacggttgtgaaaaactactggtggacgcggatgataagctcaaggacgcctta
aagctgaaagacgccaaggtactgcgggtcagcggtatgcagttggaagcaacgactaat
ggtcgcggcctgccgcgcttgaaagtcacctactacgacgaagacggcactcacctggcc
gagtggtttgcgctggaaactcccgctcagcggcgcgccttctatgccgcctttctgcgc
taccatctgcgcgcaccgggaggtaaatggcagccgctaagcgccgaggaggtcgtcgcc
gaacagcgccgcctacgccacccggattttgtcgtgggtcgcaaagtagggcgccatttc
caaatccgtgacaagctgtttgactatgcaggccgctaccgcaaagctgtggaggcgggg
tag
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