KEGG   Halomonas sp. BDJS001: OM794_17950
Entry
OM794_17950       CDS       T10426                                 
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
habd  Halomonas sp. BDJS001
Pathway
habd03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:habd00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    OM794_17950 (tssM)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:habd02044]
    OM794_17950 (tssM)
Secretion system [BR:habd02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   OM794_17950 (tssM)
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical MMR_HSR1
Other DBs
NCBI-ProteinID: UZH09201
UniProt: A0A9E8D3K2
LinkDB
Position
complement(3853841..3857371)
AA seq 1176 aa
MAMWAVVIVLLLVAIWWLGPSWEVRDSYPLGPWVNRLLATLALATLVAVIWGVRLSRRLR
EADQLAQDVESHQSDPIQESIEQQEASLNHVLSEIIDSVGGGDSSRYRLPWYLVMGVENA
GKTSLVNRSGQNFALSNVMKASGISSKKNRFGFDWWIGDKAVLIDPDGELLTQGALETGE
PVELNSRLWDHFTEWLERNRPRRPLDGVVLVLDLARLSHAQVAVRKAYATLLRSRLRELM
ERHGSRLPVYVTFSKMDLLHGFDDFFRHYSRAARRAPLGFTFSAKSIDTPGKWEEEFAAA
YDSMLERLNRAMPTMLVECRDREERESVFRFVRQLAGLRDVLLGFLNEALSSDRFSTAAI
VRGTYFTSVYQQGVPEDPFVDAAARRYGMSESVQPAHRATRSALYFTEELFEKVIYPEAG
LAGDNAKVAHRRQRIRQACIVGCMLVAAVMIGGWSHFYQKNATSLATVEHRAETFLATHP
EEFQSDDPTGYEMLAPLDRLRDAMQTFEGYRTHTPFLADMGLYQGHVIGGQVENAYLAML
EYQFLPALMVGIMDDMNREEEGSNAKLALLRILRMMSDAGGRQPERVHDFMAQRWQSDFP
QRGEIQDRLLDHLDYALQHSDLESKVAAGNRRAEYAMAPLRGSLVAAIEDLSRVPMDERV
YATMKADSSRRGDPLDLRRQVGSMFNTVFMARNDEPSYVQLPYLVTRGGFENHFLQQLDR
ATELALIDLWVLDQREDINFSNADRQQLQDALRDYYVSDYRVSWRDALRNTLLVPLPDIH
QAAVVADALVSAERPLDRLLAAVEHNTRLYPELPDDDEEAREALQNSPRYQLAHDIEQQF
TEINKLSNAQEGDPSSLEEIKSAVTELRDYLLEIDEASDPGRAAFIGARDRLSLRGDDPI
YRLQRIADSSPEPVAGMLKSLADQSWQLIMASAISHLENIWIDEVVAPYQERLAGRYPLV
PSASRDASLSDFEAFFAPEGILDSFYQDNLQPFIEGAPEQLVDTQGNSLLRESVFAAVSQ
AEQIRRAYFGPDGALDVEFSLEPISLSPDKRRSVISADGQLIEYTHSASSRVSMIWPNTL
RGGTDSRITMVPSQVNRSPRSMTRDGAWAWFRLLEEADITSVNERELELRFNVDGGAMRY
RLFTDSTPNPFTRSPAAGFQLPSALYAERGPYANET
NT seq 3531 nt   +upstreamnt  +downstreamnt
atggccatgtgggccgtggtgatcgtactactgttggtagctatctggtggttagggcca
agctgggaagtgcgtgacagctacccgttaggtccctgggtcaatcgcttattggccacc
ttggcgttggcaacgctagtggcggtgatttggggagtgcgcctctcccgtcggctgcgt
gaagctgatcaactcgcccaggacgtggagtcgcatcagtcagatcccatacaggagagt
atcgagcaacaagaagcctcgctgaaccacgtactatcggaaattattgatagtgttggc
ggcggggacagcagccgctaccggctcccctggtatttggtcatgggcgtcgaaaacgcg
ggcaaaaccagcctggtcaatcgctcagggcagaactttgcgctgtccaatgtcatgaaa
gcctcaggtatcagcagcaagaaaaaccgctttggctttgactggtggattggtgataaa
gcggtactgatcgaccccgacggcgagttattgacccaaggcgcactggaaacaggcgag
cctgtcgaactcaatagccgcctctgggatcacttcactgagtggctagagcgtaaccgc
ccacggcgcccgctggacggtgttgtactggtgcttgatttagcgcgtcttagccacgcc
caggtcgccgtacgtaaggcttacgccaccttattacgcagccgcctgcgtgagctgatg
gagcgccacggtagccgcttaccggtttacgtcaccttcagcaaaatggatttgctgcac
ggttttgacgatttcttccgccattattcgcgggcggcacggcgggcgccgctaggcttt
accttctcggctaaatccattgatacaccaggaaagtgggaagaggagttcgccgccgcc
tacgacagcatgttggaacggcttaatcgtgcgatgcccaccatgctggtagagtgccgc
gaccgcgaagagcgggaatcggtgttccgctttgtgcgccaactagcagggctgcgcgat
gtgctgctaggtttcctcaatgaagcgctctccagcgaccgtttttccaccgcggccatt
gtacgcggcacgtatttcacctcggtctaccaacaaggggtacctgaggatcctttcgtg
gatgctgcggcacgccgttatggcatgtctgaaagcgtacagccggcgcaccgggcgacg
cgcagcgcgctgtatttcaccgaagaactgtttgaaaaagtcatttatccggaagctggt
ctggccggtgataacgccaaagtcgcccatcgccgacagcgtattcgccaagcatgcatt
gttggctgcatgttagtggctgcggtaatgattggtggatggagtcatttctaccagaaa
aacgcgacctcgcttgccaccgtcgaacatcgggcggaaaccttcctggccactcatccc
gaagagtttcagagcgacgacccaacgggctacgaaatgctggcgccgctggatcgtctg
cgtgatgcgatgcaaaccttcgagggctaccgcacgcacacccctttccttgccgatatg
gggctttatcaaggccatgtgattggcggacaggtagaaaatgcctacttagccatgctg
gagtaccagttcctgccagccttgatggtgggcatcatggatgacatgaaccgcgaagag
gagggcagtaacgccaagctggcgctgctgcgaattttgcgcatgatgtctgacgccggt
ggccgccagcctgagcgcgtacacgactttatggcacagcgttggcagtcggatttccct
cagcgtggtgaaattcaagatcgtctgctcgaccatttagattacgccctgcagcacagc
gatttggagagcaaggtcgccgctggtaatcgacgtgctgaatacgccatggcaccactg
cgcggcagcttagtcgccgcgatagaagacctatcacgtgtgcctatggatgagcgggtc
tacgccaccatgaaagctgacagtagccgtcgcggagatcctctcgatttgcgccgtcag
gtggggtcgatgttcaacacggtgtttatggcgcgtaacgatgagccctcgtatgtgcaa
ctgccgtatctggttacccggggcggcttcgagaaccacttcctgcaacagcttgataga
gcaaccgaactcgctctgatcgacctgtgggtactggatcagcgcgaagatatcaacttc
agcaacgccgaccggcagcaactgcaagacgctctgcgtgactactatgtcagtgactac
cgggtgagctggcgcgatgccttgcgtaatacgctgctggtgcccttgccggatattcac
caggcggcggtggtcgctgatgcactggtcagtgccgagcgtccgctagaccgtctgtta
gcggcggtcgagcataatacccgtctctatccggaactgcctgacgatgacgaggaagcc
cgcgaagcgctgcagaactcgccgcgttatcagcttgcccacgatatcgaacagcagttt
accgagattaacaagctctccaacgctcaagagggggatccctcctcgctggaagagatt
aagtcagcagtaacggagctgcgtgattacctgctagagatagacgaagccagcgaccca
gggcgcgctgctttcataggcgcgcgtgaccgcttatcgctgcgcggcgatgatcccatt
tatcgcctgcaacgtatcgctgacagctctcccgagccggtggcgggcatgctgaaaagc
ctggcagatcaaagctggcagctcatcatggcaagcgctatcagtcacctggaaaatatt
tggatagatgaggtggtggctccttaccaagagcgtttagccgggcgctatccgctggtg
cccagtgccagccgagatgcgtcgctaagcgactttgaagccttctttgcgcctgaaggc
atactcgacagcttctatcaggataacctgcagccctttatcgaaggtgcgcctgagcag
ttggtggacacccagggcaattcgttactgcgtgaaagtgtgtttgccgccgtgtcccag
gcggagcaaattcgccgagcctactttggccctgatggcgcactagacgttgagttctcg
ctagagccgatcagcttaagccccgacaagcgtcgcagtgtgatcagtgccgatggccaa
ctcatcgaatacacgcacagtgccagcagccgggtatcgatgatttggccgaatacgctg
cggggcggcaccgatagccgcattaccatggtgcccagtcaggtaaaccgctcgccgcgg
agtatgactcgcgatggcgcctgggcctggttccggctgttggaagaggcagacatcacc
agcgtcaatgagcgtgagttagagcttcgtttcaacgttgacgggggcgctatgcgttat
cgcctatttaccgatagcacgcccaatccctttacccgttcgcccgccgcaggcttccag
ctaccgtcggcactttacgcagaacgagggccctatgctaacgaaacttaa

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