KEGG   Halomonas sp. BDJS001: OM794_17970
Entry
OM794_17970       CDS       T10426                                 
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
  KO
K11907  type VI secretion system protein VasG
Organism
habd  Halomonas sp. BDJS001
Pathway
habd03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:habd00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    OM794_17970 (tssH)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:habd02044]
    OM794_17970 (tssH)
Secretion system [BR:habd02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   OM794_17970 (tssH)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_5 ClpB_D2-small AAA_16 AAA_22 Clp_N TniB NBD_SMAX1 AAA_7 AAA_25 AAA_14 nSTAND6 NACHT bpMoxR DUF7310 Sigma54_activat SLFN-g3_helicase AAA_11 ABC_tran_CTD AAA_6
Other DBs
NCBI-ProteinID: UZH09205
LinkDB
Position
complement(3861275..3863896)
AA seq 873 aa
MLRVELPALISRLNDVSRHGLEQAAVLCAEQQAPEVTTGHLLLALVDQPLCDVRILLETL
DVDVEELRARMAEESRPPRDLEVSTPSFSPLLVELLQDAWLLAATEYGHQALRSGVILTA
LLHNAPRYLGPKSTALLEDINRENLRRHLERLTADSAEAPRESAGASQRQTAHSAGDDSA
LARFATSLTEQARNGELDPVLGRDPEIDQMLDILGRRRKNNPIVIGDAGVGKSAVVEGLA
ARIVAGQVPAALADVELLTLDLGALQAGAAVKGEFEKRLKAVIDEVKNAPRPTLLFIDEA
HTLIGAGNQEGGGDAANLLKPALARGELRTIAATTWREYKKYFEKDPALSRRFQPIALSE
PSVEQALVILRGLRDVYERAHGVLIGDSGLRAAAALSARYLAGRQLPDKAIDVLDTACTR
LAQALDTPPRKLSHLQSEHIAALRERDQVERERLLGREPDSERHHDLTERLAKLEEELAS
LEAAWQAQRECVDAIVALHRQLLEATEGDAVDQLPEGVHQELAEREQQLAQLQEAFALVN
PSVEEAQIAQVIGDWTGVPVERMTSDELTRLTELPTHLDALIQGQGSAIERIHRHLLTAR
ADLRRPGRPLGAFLLVGPSGVGKTETVVQIADQLYGGRQFLTTINMSEYQEKHTVSRLIG
SPPGYVGFGEGGLLTEAIRQRPYSVVLLDEVEKAHPDVLNLFYQAFDKGELADGEGRVID
CKNVLFFLTSNLGYEAIVSYGDDPAALDAALYPVLAEFFKPALLARMEVVPYLPLNGDTL
RDIVKAKLDTLATRIRERHRHAEVVLDDSLAEAICKRATRSENGARMLESVIDGELLPPL
SRALLERMARRENVSRVVLGTDAESGAFTAEVA
NT seq 2622 nt   +upstreamnt  +downstreamnt
atgcttagggtagagctaccggcacttattagccgactgaatgacgtttctcgtcatggc
ctggaacaggctgcggtgctgtgcgcggaacagcaagcgcctgaggtgaccaccggtcac
ctgctgctggcactggtcgaccagccgctatgtgatgtgcgcatactgctggaaacgctt
gatgtcgatgtcgaggaactgcgtgcaagaatggcggaggagagccgtccgccgcgtgat
cttgaggtgtcgacacccagcttttcaccgttattggtagagctgctccaggatgcatgg
ttgctggcggccaccgagtacggtcatcaagcgctacgcagcggcgtgattttaacggcg
ttactgcacaatgccccccgttacttagggccgaagagcacggcgctactggaagatatc
aatcgcgaaaatttgcgtcgccacttagagcgcttaacagcagattcagcagaagcaccc
agggagagtgcgggcgctagccagcgccagactgcccattctgctggcgatgacagtgca
ctggcacgttttgccacttcgctgaccgaacaagcccgcaatggtgagcttgaccctgtc
ctggggcgtgacccggaaatcgaccaaatgctcgatatcctggggcgtcggcgtaaaaac
aaccctatcgtgattggcgatgctggggtgggtaaaagtgccgtggtagaaggcttagcg
gcacgcattgtggcggggcaagtgcccgcggcgctggccgatgttgagctactgaccctt
gacctcggggcgctgcaagccggtgccgcggtgaaaggtgaatttgaaaaacgcctgaaa
gcggtgatcgacgaagtcaaaaacgccccgcgccctacgctgctgtttatcgatgaagcg
cacacgctgatcggtgcgggcaaccaggaaggcggcggtgacgcggccaacttgctcaag
cccgccctggcaaggggtgagctacgcactatcgcagctaccacttggcgggagtacaaa
aagtacttcgaaaaagacccggcgctttcgcggcgtttccagccgattgcgctttccgag
ccaagcgttgagcaggcgctggtgattctacgcggcctgcgcgatgtatatgaacgcgcc
cacggtgtgctgattggcgatagtggtctgcgagctgccgctgcgctttctgcccgttat
ctggcgggtcgtcaattgcccgacaaagccatcgatgtgctggataccgcctgtacccgg
ttggcgcaagccctggataccccaccccgcaaactaagccacttgcagagtgagcatatc
gccgcgctacgtgagcgcgatcaggtcgaacgtgaacgactgctggggcgcgaacctgat
agcgaacgccaccacgacttaaccgaacgtttagccaagctggaagaggagctagcaagc
ctggaagccgcttggcaagcgcagcgcgaatgcgtcgatgccattgtggcgctacaccgc
caattgctagaggcaacagagggcgatgccgttgatcaactacccgagggtgttcatcaa
gagctcgctgagcgggagcagcagttggcccaactgcaagaggcatttgcgctggttaac
cctagcgttgaagaagcccagattgcccaggtaattggtgattggaccggcgtaccggtc
gagcgaatgaccagcgacgagctaacgcgactcaccgaactgcccacgcatctggatgcg
ctaatccaggggcagggcagtgccattgagcgcatccatcgccacttgctaaccgcgcgt
gctgatctccgtcgccctgggcgaccattgggtgcatttctgctggtaggccccagcggt
gtaggtaaaaccgaaactgtggtgcaaattgccgaccagttgtatggcggccgtcaattc
ctcaccacgatcaatatgtcggaatatcaagagaagcatacggtttcacgcctgattggt
tcgccgccggggtatgtcgggtttggtgaaggcgggctactcaccgaagcgatccgtcag
cgcccctattcggtggtgctgttggacgaagtcgaaaaagctcaccccgatgtgctgaac
ctcttctatcaagcgtttgataaaggcgaattggccgatggggaagggcgcgttatcgat
tgcaaaaacgtactgttcttcctcacctctaacctgggttacgaagctatcgtcagctat
ggagatgacccagccgcactcgacgcggcgctctatccggtgctggctgagttcttcaaa
ccagcgctgttggcgcgaatggaagtcgtgccttacctgccgctgaacggcgataccctg
cgtgacatcgtcaaggccaagctggataccctggcaacacgcatccgcgagcgccatcgc
catgccgaggtagtgcttgatgacagcctggccgaggcaatttgcaaacgtgcgacgcgg
agtgaaaacggcgcacgcatgctggagtcggtgatcgacggtgaactgttgccgccgctc
tcccgtgcgctgcttgagcgtatggcgcggcgcgaaaacgtcagtcgggtagtgctgggc
acggatgctgagagcggcgcttttactgcggaggtggcatag

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