KEGG   Halomonas sp. BDJS001: OM794_18000
Entry
OM794_18000       CDS       T10426                                 
Symbol
tssF
Name
(GenBank) type VI secretion system baseplate subunit TssF
  KO
K11896  type VI secretion system protein ImpG
Organism
habd  Halomonas sp. BDJS001
Brite
KEGG Orthology (KO) [BR:habd00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:habd02044]
    OM794_18000 (tssF)
Secretion system [BR:habd02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   OM794_18000 (tssF)
SSDB
Motif
Pfam: T6SS_TssF
Other DBs
NCBI-ProteinID: UZH09211
LinkDB
Position
complement(3869077..3870840)
AA seq 587 aa
MLNRYYRDELNFLKRQGREFAEGNPGLSRFLSERSTDPDVERLLEGFAFLTGRMREKVED
EFPELTHSLISMLWPNYLRPVPSMTVVQFTPTWHALSTHQLLERGTELASKPVDGTTCMF
RTCHDVTLYPLEHAGVESRHTRDASIVELALDVHSDQPLSAMGMDTLRLHLGGDAYTART
LYLWMSHYLARVELEIDGKRLPLPKQLLQPVGFDRHHALLPYPRNVYQGYRILQEYLCFP
EAFHFFDVTGLNQHLPAIPADKIVLRLEFERTLPTDARVKDEHFALYCSPAINLFSHDAE
PVDVSGERSEYRIHPNSRSPGHYEIFSVDKVEGWLENENGKGRGTPREYVPFESFQHQVK
RDRGNDASYYRLRVRDSLRGDGFDHDISFVRGDERSYIGMSETVSLGLTCSNRELPERLT
VGDICYSTEESPSYAMFQNITRPTPVLRPTLDGSLLWTLISNLSLNYLSLLERDALCSVL
RAYDFRALVDRQAERVAQKRLAGIVSIETQPIDRLKKGLPIRGLRSVMTLDQDAFGDEGS
LYLFGSVLARFFSLYASINSFHELHVINRQNHERYKWTLQSGQQPLM
NT seq 1764 nt   +upstreamnt  +downstreamnt
atgctaaatcgctattaccgggacgagctcaattttctgaagcgccaagggcgagaattt
gcggagggcaaccccggcctgagtcgcttcttgtcagagcgtagtaccgaccctgatgtt
gaacgtctactagaaggctttgcttttctaactggccgtatgcgcgagaaagtggaggat
gagttccccgaacttacccattcactgatcagcatgctatggccgaactacttgcgcccg
gtgcctagtatgacggtggtgcaatttacccctacatggcatgcgctaagtacccaccag
cttctggagcgaggtacggaattagccagtaagccagtggatggcactacctgcatgttc
cgcacgtgtcatgacgtaacactctatccgctggaacatgcgggggttgagtcgcgacac
acacgtgatgcctccattgttgagttggcgcttgacgtacatagtgatcagccccttagc
gcgatggggatggataccttacgtttgcacctgggtggagacgcttatacagcgcgtacg
ctttatctgtggatgagtcactacttagcgcgcgtggagctggaaattgacggtaaacgg
ctgcccctgcccaagcagttgctgcagccggttggttttgaccgtcaccatgcgctattg
ccctatccaaggaatgtgtatcaagggtatcgaatactgcaggaatacttgtgttttcct
gaggctttccatttctttgatgtaacaggcctgaaccagcacttgccagccattcccgca
gacaaaattgttttgcgtctagagtttgagcgtaccttaccgaccgacgccagggtcaaa
gacgagcattttgccttgtattgctcgccggcgatcaacctgttctctcacgatgcagag
cctgtcgatgttagcggggagcgtagtgagtaccgcattcatcccaatagtcgatctccc
ggccactatgaaatttttagtgttgataaggtcgagggctggttagagaacgaaaacggt
aaagggcgcggtacgccgcgtgagtacgtgccttttgaaagctttcaacaccaggtcaag
agagatcggggcaatgatgcctcctattaccgtcttcgcgtgcgggacagcttgcgtggt
gatggctttgatcacgacatctcctttgtgcggggagatgagcgcagttacataggcatg
tctgaaaccgtctcgctagggctaacgtgtagcaaccgagagctgccagagcgcttgacg
gtgggcgatatttgttactcgacggaagagagtccctcttatgccatgtttcagaatatc
acgcgccccacgccagtgttgcggcccacgctagacggcagtctgctatggacattgatc
tctaatttgtcgcttaactacttgtccctgctggagcgcgatgccctgtgctcagtattg
cgtgcctatgatttccgagccctggtggatcggcaggccgaacgagtggctcaaaaacgg
ctggcaggcatcgttagcattgaaacacagcccattgaccggctgaaaaaaggcctgccc
attcgtggtctgcgttcggtcatgacgctggatcaagatgcctttggcgatgaaggcagc
ctgtacttatttggcagtgtgctggcgcggttcttctcgttatacgccagcatcaactcg
tttcatgagctgcatgttattaaccgtcaaaaccacgagcgctacaaatggaccttacag
tcggggcagcagcctctgatgtag

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