Halomonas sp. BDJS001: OM794_18305
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Entry
OM794_18305 CDS
T10426
Name
(GenBank) extracellular solute-binding protein
KO
K10117
raffinose/stachyose/melibiose transport system substrate-binding protein
Organism
habd Halomonas sp. BDJS001
Pathway
habd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
habd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
OM794_18305
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
habd02000
]
OM794_18305
Transporters [BR:
habd02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Raffinose/stachyose/melibiose transporter
OM794_18305
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SBP_bac_1
SBP_bac_8
SBP_bac_11
SHOCT-like_DUF2089-C
Motif
Other DBs
NCBI-ProteinID:
UZH09267
LinkDB
All DBs
Position
complement(3934223..3935512)
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AA seq
429 aa
AA seq
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MQVSNNYNVPCSRPRHLALAVAVVAALGSVSAAADTTVTVLRVESSSAEKRYYDEVVAEF
ESQHPDINVEFEYLANEAYKTRLPTMLQSSQRPDIYYTWGGEGLRDQVDAGFVRDLTEPM
RDGWQDIYPTSAVLAFTLDDRVYGAPLYATVVGIWANTALTEPAGVNVETIKTWEDFENA
VVALREEGITPLVVGGQDGWPLHFYWGSLVTRLAGGEGIEAAKSGDNGGFNGEPFVRAGE
MLQALVELDPFQSGFMATSYERASGMFGDGEAAFHVMGDWDYLPSKQRSASGEGVPDEDL
RFIPFPTVAGGEGNEQSFGGMNGFAVTRDAPDEAVEFLRFLLNAENQRKAAATGIFVPVA
EGSAEALETPYARRVAEILDESEFHQVFLDQALGTSVGATINDISGDLAQGVITPEEAAA
RIEEAWQFR
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtatctaacaactacaacgtgccctgttcacgccctcgtcacttagcgctagcc
gttgccgttgttgctgctttgggatccgtctctgcggcagccgataccacggtgacggtg
ttaagggttgagagcagcagcgctgaaaaacgctactacgatgaggtggtcgccgagttt
gagtcgcaacatcccgatattaacgttgagttcgaatacctggccaacgaggcctacaaa
acgcgcctgcccaccatgctgcagtccagccagcgcccggatatctactatacctggggc
ggcgaagggctgcgcgatcaggtggatgcggggtttgtacgcgacttaaccgagccgatg
cgcgatggctggcaggatatctaccccacgtcagcggtactcgccttcaccctggatgat
cgtgtctatggtgcgccgctctacgccaccgtggtgggaatctgggcgaacaccgcgctg
acggagccggcaggggtcaatgtcgaaacgatcaagacctgggaggattttgaaaacgcc
gtggtggcgctgcgggaagagggcataacgccgctggtagtcggtggtcaggatggctgg
ccgctgcacttctattggggctctttagtcactcgtctggccggtggtgaaggcatcgaa
gcggccaaaagtggtgacaacggcggctttaacggcgagccctttgtacgtgccggtgaa
atgctgcaggcgctggtcgagcttgacccttttcagtccggctttatggccacctcctac
gagcgtgccagcggcatgtttggcgatggggaggccgcctttcatgtgatgggtgactgg
gactaccttccttccaagcagcgctctgccagcggagagggcgttccggatgaggacttg
cgttttattcctttcccaacagtggccggaggagagggaaacgagcagagtttcggcggt
atgaacggctttgctgttacccgcgacgcccccgacgaagcggtggagttcctgcgtttt
ctactcaatgcagagaatcagcgcaaagccgcggccacgggcatctttgtgccggttgcc
gagggttccgccgaagcgcttgaaaccccctatgcccgccgcgtcgcagagatccttgat
gagtccgaattccatcaggtgttcctggatcaagcgctgggcacctccgtcggtgcgacc
atcaacgacattagtggcgatctggcccaaggcgtgatcacgccggaagaggccgccgcc
cggatcgaagaggcctggcagtttagatga
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