Halomonas sp. BDJS001: OM794_20235
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Entry
OM794_20235 CDS
T10426
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
habd Halomonas sp. BDJS001
Pathway
habd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
habd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
OM794_20235
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
habd02000
]
OM794_20235
Transporters [BR:
habd02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
OM794_20235
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
TOBE_2
AAA_22
ABC_ATPase
SMC_N
RsgA_GTPase
AAA_5
AAA_16
AAA
AAA_25
Rad17
AAA_15
nSTAND1
AAA_28
AAA_29
AAA_30
ATPase_2
nSTAND3
NACHT
AAA_14
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
UZH09633
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Position
4358382..4359548
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AA seq
388 aa
AA seq
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MSELVSFKPAETQTSAPITEPRIAVQLDGVLKQFGDATALHRVSMKIFQGEFLTLLGPSG
CGKTTLLNLMAGFLEADNGEIFIDGELVTETPPYQREIGIVFQSYALFPHMNVSENVGYG
LRMRRTPKAEIKQRVDQALKMVKLEGFEERRPKELSGGQQQRVALARALVIRPKVLLLDE
PFSALDKNLRLNMQQEIKEIQRKLGVTTVFVTHDQDEALAMSDRVVVMSAGHVRQVAPPH
EIYRHPIDPFVASFVGDANIFPAHYTGHDNGSGTIEFGSTKLLLPIANIHGQVGDSVDLY
ARPENLRLAPLHEEADLAGTVIGHVFLGDHVDVSVHVPETGIDRPVTIRSPGLDALDSWP
TGTGVGINFICRDTTAFTRASTSEESTQ
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagttagttagctttaaacctgctgagacgcaaacatcagcccccataacagaa
ccccgtattgctgtgcaactggatggcgtactgaagcagtttggcgatgccacggcattg
caccgtgtctctatgaagatattccaaggagagtttttaacactattgggcccctccggc
tgtggcaaaaccaccttgttaaatctaatggcaggttttcttgaagccgataatggtgag
atttttattgatggtgaactggttaccgaaacaccgccctaccagcgggaaataggtatc
gtgtttcaaagttatgcgctgttcccccatatgaatgtcagcgagaacgtgggctatggc
ttgcgtatgcgtcgcactcccaaggcggagattaagcaacgtgtcgatcaggccttaaag
atggtgaagctggaaggtttcgaggagcgacgacccaaagagttgtcagggggacagcag
cagcgcgtggcactcgcacgcgccttggttatacggccaaaggttctacttctggacgaa
cccttctcggcactggataaaaacctgcggctgaacatgcaacaggagatcaaggagatt
caacgcaagcttggggttacgacggtatttgttacccatgatcaggatgaagcgctggca
atgtcagaccgagtcgtggtgatgtccgcgggccatgttcggcaggtagcgccaccccat
gagatctaccgtcatcctatcgacccttttgttgcctctttcgtcggagatgccaatatt
ttccctgcccactacaccggccatgacaatgggtcgggaaccatcgaattcggcagcacc
aagctccttctgcccattgccaatattcatggtcaggtcggcgatagcgtcgatttgtat
gcacgccctgagaatcttcgcctcgcccctctacatgaggaggctgatctcgccggtact
gtgattgggcatgtcttcctgggtgatcacgtcgatgtctccgttcatgtccctgagacc
ggtattgatcgtcctgtgactattcgcagtcctggtttagacgctctagatagctggcca
acgggcaccggggtgggtatcaattttatatgccgagataccaccgcctttacacgcgcc
tcaacctcagaggagagcactcaatga
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