Halomonas sp. BDJS001: OM794_20275
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Entry
OM794_20275 CDS
T10426
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
habd Halomonas sp. BDJS001
Pathway
habd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
habd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
OM794_20275
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
habd02000
]
OM794_20275
Transporters [BR:
habd02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
OM794_20275
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Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_1
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
UZH09641
UniProt:
A0A9E8D4L6
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Position
complement(4364839..4365858)
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AA seq
339 aa
AA seq
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MKKSLFITAIVLGISSGNAMAQDVLVVDTWGGSFRDLIDEAIAQKFTEETGVEVIYTTGG
TIDRLNKAKLASEPESDVTFTTSHVGWLYATDGLFEELDMTRIPNAEHLVDQARVSPYHI
GAWGYGYTIAYRPDLLPEGVSFDSWEDLWSPELEDSVALPDFDPSHIIAVSALLSGADAE
NWQEGIERLESLKPNLRAFYTNDANSQQLISTGETPVQLMLSMNAQNMINEGVNIELATP
SEGVVLGVDTMAITRGSSNQDLAYQFINIALSPDVQARIAEIKHGSPTVDNAELSAELTD
SAAILATPEEWDQTINVDPQLRAEKMGEWRQWFTENIMN
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagtcgttatttataacagctattgttcttggtattagttctggaaatgccatg
gctcaagatgtgttagtagttgatacttggggtggtagttttcgcgatttgattgatgag
gcgatcgcccagaaatttaccgaggaaacgggtgttgaagtgatttacaccaccggaggt
accattgatcgccttaataaagccaagttggctagtgagcctgagagcgatgtgactttc
actacctctcatgtgggatggctttacgcgacggatggcttgtttgaagaactggatatg
acgcggatacccaacgcggaacatttggttgatcaggcgcgggtcagcccctatcacatt
ggtgcctggggctatggctacactattgcttaccggcctgacttacttcctgagggggta
agttttgatagctgggaggatctctggagtcctgagctagaagactctgtcgcattaccc
gattttgaccccagccacattattgctgtttcagctttgctttcaggggctgatgctgag
aactggcaagagggcattgagcggcttgaaagtttaaagcctaatctacgcgctttttat
accaatgatgctaatagtcagcagttaatttcgacgggtgaaacgcccgtacagttgatg
ctttcaatgaacgcgcaaaacatgattaatgaaggcgttaatatcgaactggcaacacct
agcgagggtgtcgtgttgggtgtcgacaccatggcgattactcgtggctcgagcaatcag
gatcttgcctatcaattcattaacatcgcgttgtctcctgatgtacaggcccgcattgcc
gagatcaagcatggcagtcccacggtcgataatgcagagctatcggctgagttgactgat
tcagcagccattctggcgacgcctgaagagtgggatcagaccattaacgtcgatcctcaa
ttgcgtgccgagaaaatgggtgaatggcgtcagtggtttactgaaaacatcatgaactga
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