Halomonas sp. BDJS001: OM794_21350
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Entry
OM794_21350 CDS
T10426
Symbol
ybiO
Name
(GenBank) mechanosensitive channel protein
KO
K22044
moderate conductance mechanosensitive channel
Organism
habd Halomonas sp. BDJS001
Brite
KEGG Orthology (KO) [BR:
habd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
habd02000
]
OM794_21350 (ybiO)
Transporters [BR:
habd02000
]
Other transporters
Pores ion channels [TC:
1
]
OM794_21350 (ybiO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_TM1
MS_channel_2nd
MS_channel_1st
MS_channel_3rd
Motif
Other DBs
NCBI-ProteinID:
UZH09840
LinkDB
All DBs
Position
complement(4597768..4600167)
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AA seq
799 aa
AA seq
DB search
MKPLRLLPWLGVWLLAMIALMATPAMAQSAPSESASADGAASSEEAAPTSYEALANLLED
EQSRQELIEMLRNQASALPEGVATELSPEAAAQGSEIAPEDVSLPRQLAELTSRVVSDVG
GQFEQVVGIVGGLFSGQEADSVFDMAAFTSAAINLGMVIIATFALFIIVRRLAKPLFTKL
SGWSLNGNNLTPVLRLVICVAIAAVIDVLLVGLAYVGGNLVATFAVGEAGELSTRASLFL
NAFLIIELLKAAVRMLFSSRYEGLRLLPISAREASYWNRWLARLIGMVGYGLMVVVPLVN
FYVAASLGQAVGTLIMVLAFIYAVVVVLKNRTRLRDNLNEMAAKSTLTASRVSLQLFART
WHLFALLYFLMVFVLTLTRPGDALPFVMFATLKSLAAIVVGLLVSSFLTQTIGRRITLSD
DLRRKLPLLEKRLNSYVPNALRVLRTIILIVVIMMVLNAWGAFNLAAWYASERGANLVGN
LTSVAVILIVALAVWLGLASLIEHKLNPETGHGEPSARAKTLLSLFRNALAIAMVTITGM
IVLSEIGINIGPLIAGAGVLGLAIGFGAQKLVQDVITGVFIQIENAMNTGDVVTVGGITG
TAERLSIRSVGIRDLSGTYHIVPFSSVDTVSNYMREYGNHVGEYGIGYSESIDEAIEQLK
LAFEDLKASEEHGFKLLADLTVAGVTALADSSVNIRVVIKTTPGDQWAVGRAYNRLVKMR
FDEAGIEIPFPHTTLYFGDNKNGNPPPAHVRVLESTAKEKKVEDSAVTTPAAASDTSQGV
QQTSEPDHLKPDHDDVDET
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
gtgaagccacttcgtttattaccctggctaggtgtctggctattggcaatgattgcctta
atggccacgccagcaatggcgcagagcgcgccaagtgagtcggccagcgccgatggcgca
gcatcctctgaagaagcggcacctacgtcctacgaggcactggcaaacctgctagaggat
gagcagtcgcgacaagagttgattgagatgttacgcaatcaagcctcagcactgcccgag
ggtgttgctactgaactctccccggaagcggctgctcaaggcagtgaaatagcgccggag
gatgtctcgctgccgcgccagctagctgagctcaccagtcgtgtggtaagcgatgtgggg
ggccagttcgaacaagtggtaggcattgtcggcggtctgttttccgggcaagaggcggac
agtgtctttgatatggccgcgttcaccagtgcggcgattaatctgggtatggtgattatc
gccacctttgcactattcatcatcgtgcgacggttggctaagccgctgtttactaaactc
agcggctggtcgctgaatggcaataatttaacccccgtgctacgtctggtcatctgcgta
gccattgcggcagtcattgatgtgctgcttgtgggcttagcctacgtgggcggtaattta
gtggcgacatttgctgttggggaggcaggagaactctcgacccgtgcttcactgttcttg
aatgcgttcttgattattgagctgctcaaagccgcggtgcggatgctgttctcttcgcgc
tacgaagggctgcggctactgcccatctctgcccgggaggcctcctactggaaccgctgg
ctagcgcggctgatcggtatggtcggttatggcctgatggtggtggtaccgctggttaac
ttctacgtggcggcttcgctgggtcaagcggttggtacactgatcatggtgctggcattt
atctacgccgtggtcgtggtgcttaagaaccgcacccgcctgcgtgataacctgaacgag
atggcggcaaaatcaacgctcaccgccagccgcgtttcgctccagctatttgcccgtacc
tggcatctgtttgcgctgctgtacttcttgatggtgtttgttctgaccttgacgcgccct
ggcgatgcattgccgtttgtgatgtttgccacgctaaagtcgttggctgcgattgttgtc
gggctattggtgtcgtcgtttcttacccaaaccattggccgccggattaccctgtccgac
gacctgcggcgcaaactgccgctgcttgagaagcgcttgaacagctacgttcccaatgca
cttcgcgtgctgcgcacgattattctgatcgtggtcatcatgatggtgctgaatgcatgg
ggcgcctttaacctcgccgcctggtacgcctctgaacgcggtgccaacctggttggcaac
ctgaccagcgtggcggtgattttgattgtggcgctagccgtttggctgggtctggcgagc
cttattgagcataagctcaacccggaaaccggccacggagagccgtcggcacgggcgaaa
acgctgctcagcctatttcgtaatgccctggcaatcgccatggtgaccattaccggcatg
atcgtgctgtcggaaattggcatcaatatcggcccgctgattgccggtgccggtgtactg
ggtctggcgattggttttggcgcccagaaactggtgcaggacgttatcaccggggtgttt
attcagatagagaatgccatgaacaccggggatgtggtgacggtaggtggcataacaggt
accgccgaacggctcagtatccgctctgtagggattcgcgacctatccggcacttaccac
atcgttccgttctccagcgtggataccgtgtctaactacatgcgtgagtacggcaaccat
gtgggcgaatatggcattggctatagcgagagcatcgacgaagccatcgagcagcttaag
ctggcctttgaggatctcaaagccagtgaagagcatggctttaagctactggcggatctc
accgtggccggtgtgacggccctggcggacagctcggtgaatatccgtgtggtgattaaa
accacgccgggggatcagtgggccgttggccgcgcctacaatcgcttggtgaaaatgcgc
ttcgatgaggcgggtatcgaaatacccttcccccataccacgctctactttggcgataat
aaaaacggcaatccaccgcctgcccatgtgcgggtgctggagtcgaccgctaaagagaag
aaggtggaggattcagcggtgactaccccggcggcggcgagcgacacctctcaaggtgtg
cagcaaaccagcgaacctgatcacctgaaacccgaccacgatgatgttgatgaaacctaa
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