Halomonas sp. BDJS001: OM794_22925
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Entry
OM794_22925 CDS
T10426
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
habd Halomonas sp. BDJS001
Pathway
habd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
habd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
OM794_22925
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
habd02000
]
OM794_22925
Transporters [BR:
habd02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
OM794_22925
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
SMC_N
nSTAND1
AAA_25
Rad17
AAA_22
ABC_ATPase
AAA
AAA_19
AAA_30
AAA_5
nSTAND3
AAA_16
NB-ARC
AAA_29
ORC-CDC6-like
Motif
Other DBs
NCBI-ProteinID:
UZH10136
LinkDB
All DBs
Position
complement(4913762..4914826)
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AA seq
354 aa
AA seq
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MSFLRLESLTKCFGSNTAVQDITLDIDQGEFVSLLGPSGCGKTTTLQMIAGFVEPTRGRI
LMKGEDITSCKPNQRGIGIVFQSYALFPHMTVAENVRFGLEMRKIPAGESRQQVSEALEL
VRLDHLEDRYPRELSGGQRQRVALARALVIRPPLLLLDEPLSNLDAQLRENMQIELRNIQ
QQVGTTTLMVTHDQSEALSLSDRVVVMNQGKVVQVDEPFAAYENPRDNFVSSFVGKTNLF
DCHIDQREGSQAHVTLGDCRLEIAVPDEIKGNKIQLSIRPEKLELTQHTAGQLQGRVRTR
LFLGNHWLYQVDSSAGELLITQPNLGAQGAAVGDDVGICWQDGAVRVLGEQANG
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgagtttccttcgtttagagtcgttgaccaagtgcttcggcagcaatactgccgtgcaa
gacatcaccctcgatatcgaccagggcgagttcgtctcgctactcggtccgtcgggttgc
ggcaagacgaccaccctgcaaatgattgccggcttcgttgagcccactcgcggacgtatc
ctgatgaagggtgaggacattacgtcctgcaagcccaatcaacgaggcatcggtatcgtg
ttccagagctatgccctgtttccccacatgaccgtggcggaaaacgttcgtttcggcctg
gaaatgcgcaagatccctgccggtgaaagccgccagcaggtcagtgaagcactggagctg
gtgcgtctcgatcacctcgaagatcgttatcctcgcgagctgtcgggtggccaacgccag
cgggtggccctggcccgagcgctggtcattcggccaccgttgctactgcttgatgagccg
ctttccaacctcgatgcacaactgagagaaaacatgcagatcgagctgcgtaatatccag
cagcaggtcggcaccacgaccctgatggtaacccatgatcaatcggaggcgctttcgctc
agtgatcgtgtcgtagtgatgaatcagggcaaggtggtacaggtggacgaaccctttgca
gcctacgagaacccgagagacaacttcgtttcttcgtttgtcggcaagaccaacctgttt
gactgccacatagaccagcgtgaaggcagccaggcccacgtcacgctcggcgactgccgg
ctcgagatcgctgtgcccgatgagatcaaggggaacaagattcagctgtcgattcgcccg
gaaaagctggagttgactcagcacacggccggccagttacaggggcgtgtgcggacacga
ctgttcctgggcaaccactggctgtatcaagtcgacagtagtgccggcgagctgttgatc
actcagccgaacctgggtgcccaaggggcggcggtaggcgatgatgtcggtatttgctgg
caagacggggcggtacgtgtcctgggggagcaagcaaatggctga
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