Halomonas sp. BDJS001: OM794_22930
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Entry
OM794_22930 CDS
T10426
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
habd Halomonas sp. BDJS001
Pathway
habd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
habd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
OM794_22930
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
habd02000
]
OM794_22930
Transporters [BR:
habd02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
OM794_22930
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_11
SBP_bac_1
Motif
Other DBs
NCBI-ProteinID:
UZH10137
LinkDB
All DBs
Position
complement(4914918..4915952)
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AA seq
344 aa
AA seq
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MKKMTSQTTAMAGLLFLGINTAFAEPLYVGSYGGSTEQAMRDGIIPAFLEEHDAEIIYVA
GNSTDTLAKLQAQRGDQELDVVLMDDGPMYQAVNLGFCSPMQDTAMLDDVYDIARFPDDK
AVGVGLVASGFAYNADMFERNGWEPPSSWKDLADEKFAGKLVVPSISNTYGVHALVMAAR
LNGGSESDIDPGFEFMQEQVAPNILSFEPSAGKMSELFQNEEIALSVWGSGRLRALASTG
FPGAFAYPEEGAVALMVAACVIEGSEERELAEAFIEHLLAPESQELLADTQGWGPAQRHA
QLSDELASVLPYGEKVDQLVAVDWDVINPNRLEWTNRWNRQVER
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaatgactagccaaacgactgctatggcgggactgctgtttctcggcatcaat
accgctttcgctgaaccgctttatgtcggctcctacgggggctctaccgagcaagccatg
cgcgatgggatcattccagcgtttctcgaagagcatgacgcggaaatcatctacgtggca
ggtaactccaccgataccctggccaagctacaagcccagcgtggtgaccaggagctggat
gtggtgctgatggacgatggccccatgtaccaagccgtcaacctgggtttctgctcgccg
atgcaagataccgccatgctcgatgacgtctacgacatcgcgcgtttccccgatgacaag
gccgtcggggttggtctggtcgcttccgggtttgcctacaatgccgacatgttcgagcgt
aatggctgggagccgccctcctcatggaaagacttggccgatgaaaaattcgccggcaag
ctggtcgttccttccatcagtaacacctatggtgtacatgccctggtaatggcggcgcgt
ctcaacgggggaagcgaaagcgatatcgaccccggtttcgaattcatgcaagagcaagtc
gcgcctaacatcctctctttcgagccttcggcgggcaagatgtccgagctgttccagaat
gaagaaatcgctctgtcggtctggggcagcgggcgcttgcgtgcgctggccagcacaggc
ttcccgggcgccttcgcttaccccgaagagggggcggtcgccttgatggtggctgcctgt
gtcatcgaaggcagcgaggagcgtgaactggccgaggcctttatcgaacacctgctggca
ccggaatcacaggagctgctggccgacacccagggttggggccccgcacagcggcatgcc
cagttatccgacgaattggcaagcgtgcttccctatggtgaaaaggtcgaccaactagtg
gccgtggactgggatgtcatcaatcctaaccgtctcgagtggaccaatcgttggaaccgt
caggttgagcgctag
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