Halorhabdus sp. BNX81: HBNXHr_0016
Help
Entry
HBNXHr_0016 CDS
T09448
Symbol
dppA
Name
(GenBank) ABC-type transport system, periplasmic component
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
habn
Halorhabdus sp. BNX81
Pathway
habn02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
habn00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HBNXHr_0016 (dppA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
habn02000
]
HBNXHr_0016 (dppA)
Transporters [BR:
habn02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
HBNXHr_0016 (dppA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
WEL20095
LinkDB
All DBs
Position
18343..20280
Genome browser
AA seq
645 aa
AA seq
DB search
MPRDTTRRRFLLAAGAGGLTAVAGCGGDSESTNPDTATQDDPETGSGGGSTDEPSDETDD
STEETPVDSDGGTLQMMATGSIQTLDPINAKGSGAGYNQYNQQLMYFPDGHYPPEPALAT
GYEVSDDGLTYTFDLREDVTFHDGSEFTAHDVVYSYRRLAESPNSRNKDDIIGETLTIDH
EKDATLSEPTDEETLEDVVPGSLAVEAVDDYTVEITLASPFEYTLFQIAGGAFAIIPEGS
VGDIEGYDGEYDYNEFFSTEGDGPTFAGAGPFQVDSWRKGSQITLSAFEDYYGGEPDLDG
ITYTVVGSGNTRLQRFTNGNADILEDIPTASFNPNNVSIEREAGNRSLGTYALDDGTDVN
YGEIPALTTEYIVFNTLEVPLAVRRAFAYAMNQHDIAENVYKGTGKPAYHIVPPAAYPTF
EDSQSGEASYDRHAETGYESNTDFAADGYPYGYGETRLADATTVMEQAGYGEDNRYELTA
TTITGDSGYQQVFTRLQSKLRSVYIDMDIEEAEFGTIISRAISGDMEVFGLGDGMEYPGP
QNFLRFLHGQNPSTQFTRWGAEGSYATEEYRQTAREAWDKHYAADGMTREDHNEAFQTVE
EMNWASVQELPFLHPISQRFWHDAVDVEMYGVMENQAFDNTTLQR
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgccacgtgacacgactcggcgtcgatttttgctcgccgcaggcgcagggggactgacc
gccgtcgccggttgcggcggggacagtgaatccacgaacccggatactgcaacccaggac
gatcccgagacgggttcgggcggggggtccacggacgaaccatccgacgagacggacgac
tcgaccgaggagacccccgtcgactcggatgggggcaccctccagatgatggcgaccggc
tccattcagacgcttgaccctatcaacgcgaaggggtctggtgcgggctacaaccagtac
aaccagcagctcatgtacttcccggacggccactatccgcccgaacccgcgctggcgacc
ggatacgaggtgtccgacgacgggctcacgtacacgttcgatctccgtgaggacgtcacg
ttccacgacggcagcgagttcactgcccacgacgtcgtctactcctatcgccgcctcgcc
gaatccccgaactcacgtaacaaggacgacatcatcggcgagacgctgacgatcgaccac
gagaaggacgcgacgctttccgagccgaccgacgaggagaccctcgaggatgtcgtcccc
ggcagcctcgccgtggaagcggtcgacgattacaccgtcgagataacgcttgcctccccc
ttcgagtacacactcttccagatcgccggcggcgcgttcgcgatcatcccggagggttcg
gtcggtgacatcgagggctacgacggcgagtacgactacaacgagttcttcagcaccgag
ggtgacggcccgacgttcgccggggccggccccttccaggttgactcctggcggaaaggc
agccagatcaccctctcggccttcgaggactactacggcggcgaacccgacctcgacggg
atcacgtacactgtcgtcggcagcgggaacacacgcctccagcgattcacgaacggaaac
gctgacattctggaggacataccgacggcctcgttcaaccccaacaacgtgtcgatcgag
cgtgaagcgggcaaccgttcgctcggtacctacgcgctcgacgacggaaccgacgtcaac
tacggcgagatcccggcgctcacgacggagtacatcgtcttcaacaccctggaggtcccg
ctggcggtcaggcgtgcgttcgcgtacgcgatgaaccaacacgacatcgccgagaacgtc
tacaaggggacgggtaaaccggcctatcacatcgtcccacccgcggcctaccctactttc
gaggatagccagtccggcgaggcttcctatgaccgccacgccgagaccggctacgaatcg
aacaccgacttcgccgccgacggctatccctacggctacggcgagacgcgacttgcggac
gctaccacggtgatggagcaagcgggctacggcgaggacaaccggtatgaactcaccgcg
acgaccatcaccggcgacagcgggtatcagcaggtgttcacccgtctccagtcgaaactc
cggtcggtctacatcgacatggacatcgaggaagcggagttcgggacgatcatcagtcgc
gccatctccggcgacatggaggtgttcggactcggcgacggcatggagtaccccggcccg
cagaacttcctccggtttctccacggccagaacccgtcgacgcagttcacgcgatggggg
gccgagggcagctacgcgaccgaggagtaccgccagaccgcacgggaggcctgggacaaa
cactacgccgccgacgggatgacccgcgaggaccacaacgaagccttccagaccgtcgag
gagatgaactgggcatccgttcaggaactccccttcctccaccccatcagtcaacggttc
tggcacgatgcggtcgacgtcgagatgtacggcgtcatggagaaccaggccttcgacaac
accacgcttcagcgctga
DBGET
integrated database retrieval system
