Halorhabdus sp. BNX81: HBNXHr_0360
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Entry
HBNXHr_0360 CDS
T09448
Symbol
spt15
Name
(GenBank) TATA-box binding protein (TBP), component of TFIID and TFIIIB
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
habn
Halorhabdus sp. BNX81
Pathway
habn03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
habn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HBNXHr_0360 (spt15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
habn03000
]
HBNXHr_0360 (spt15)
03021 Transcription machinery [BR:
habn03021
]
HBNXHr_0360 (spt15)
Transcription factors [BR:
habn03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
HBNXHr_0360 (spt15)
Transcription machinery [BR:
habn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
HBNXHr_0360 (spt15)
RNA polymerase III system
TFIIIB
HBNXHr_0360 (spt15)
RNA polymerase I system
SL1/TIF-1B
HBNXHr_0360 (spt15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
T4bSS_IcmS
Motif
Other DBs
NCBI-ProteinID:
WEL20435
LinkDB
All DBs
Position
complement(373658..374218)
Genome browser
AA seq
186 aa
AA seq
DB search
MVDPKETINIENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQEPKSAALIFR
SGKIVCTGAKSTDDVHESLRIVFGKLRDLEIQVDEDPEIVVQNIVTSADLGRNLNLNAIA
IGLGLENIEYEPEQFPGLVYRLDDPDVVALLFGSGKLVITGGKEPDDAKKAVDKIVSRLE
ELGLLE
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atggttgaccccaaggaaacaatcaacatcgaaaacgtcgtcgcctcaaccggtatcggt
caggagctcgatctccagagcgtggcgatggacctcgaaggggccgattacgaccccgag
cagttccccggcctcgtctatcggacccaggaacccaagtcggcggcgctgatcttccga
tcaggcaagatcgtctgtaccggcgcaaagagtaccgacgacgtccacgagagtctccgg
atcgtgttcgggaagctccgtgacctggagattcaggtcgacgaggaccccgagatcgtc
gtccagaacatcgtcacctcggccgatctgggccggaatctcaacctgaacgcgatcgcg
atcgggctgggactggagaacatcgagtacgaacccgagcagttccccggtctcgtctac
cggctggacgaccccgacgtcgtcgcactcctctttggctccggaaagctcgtcatcacc
ggcggcaaggaacccgacgacgccaagaaggccgtcgacaagatcgtctcccggctcgaa
gaactcggcctgctggaataa
DBGET
integrated database retrieval system
