Halorhabdus sp. BNX81: HBNXHr_0380
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Entry
HBNXHr_0380 CDS
T09448
Symbol
sua7
Name
(GenBank) Transcription initiation factor TFIIB, Brf1 subunit/Transcription initiation factor TFIIB
KO
K03124
transcription initiation factor TFIIB
Organism
habn
Halorhabdus sp. BNX81
Pathway
habn03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
habn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HBNXHr_0380 (sua7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
habn03021
]
HBNXHr_0380 (sua7)
Transcription machinery [BR:
habn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
HBNXHr_0380 (sua7)
Prokaryotic type
Archaeal type
TFB
HBNXHr_0380 (sua7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Zn_ribbon_tTFIIB
Trm112p
A2L_zn_ribbon
Zn_ribbon_LysW
Lar_restr_allev
Zn_Ribbon_YjdM
Zn_ribbon_PaaD
Zn_ribbon_IS1595
TerY_C
Sigma70_r4
Cyclin_C
Motif
Other DBs
NCBI-ProteinID:
WEL20455
LinkDB
All DBs
Position
complement(392972..393937)
Genome browser
AA seq
321 aa
AA seq
DB search
MTRSTRQRERERESETETDEQEGVEECPECGSDSLVKDADRGELICEDCGLVVEEGNIDP
GPEWRAFNHQERQEKSRVGAPTTQTMHDKGLTTTIDWKDKDAYGRSISSKKRSQMHRLRK
WQERIRTKDAGERNLQFALSEIDRMASALGVPRSVREVASVIYRRALDDDLIRGRSIEGV
ATSALYAACRKEGIPRSLEEISEVSRVERKEIGRTYRYISQELGLEMEPVDPKKYVPRFC
SELELSEEVQSKANEIIETTAEKGLLSGKSPTGYAAAAIYAASLLCNEKKTQREVADVAQ
VTEVTIRNRYQEQIEAMGIHS
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgacacggtctacccgccagcgggagcgcgagcgcgagtccgagaccgaaaccgacgaa
caagagggggtggaggagtgtccggagtgcggatccgatagcctggtgaaggacgcggac
cggggcgagttgatctgtgaggactgtggactggtcgtcgaggaggggaacatcgacccc
ggtcccgagtggcgggcgttcaaccaccaggaacggcaggagaagtcccgcgtgggcgcg
ccgacgacccagacgatgcacgacaaggggctgaccacgaccatcgactggaaggacaag
gacgcctacgggcgttcgatctccagtaagaagcgcagccagatgcaccgcctgcgaaag
tggcaggaacgcatccggacgaaggacgcgggcgagcgcaacctccagttcgccctgagc
gagatcgaccggatggcgtcggcgcttggcgttccccggtccgtacgggaggtcgcctcg
gtcatctatcgacgggcgctggacgacgacctcatccgtggccgatcgatcgaaggggtc
gcgacctcggcgctgtacgctgcctgtcggaaggaaggcatcccccggagcttggaggag
ataagcgaagtctcccgcgtcgaacgcaaggagatcggccgtacctatcggtacatctcc
caggaactcggcctcgagatggagcccgtcgaccccaagaagtacgtcccccggttctgt
tcggaactcgaactgagcgaggaagtccagagcaaggccaacgagatcatcgagaccacc
gccgagaaggggctgctgtcgggcaagtccccgaccggctatgcggccgccgcgatctac
gccgcctcgctgctttgcaacgagaagaagactcaacgggaggttgccgacgtcgcccag
gtgacggaagtcacgatccggaaccgctatcaggagcagatcgaagcgatgggcatccac
agctga
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