Halorhabdus sp. BNX81: HBNXHr_0470
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Entry
HBNXHr_0470 CDS
T09448
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K08678
UDP-glucuronate decarboxylase [EC:
4.1.1.35
]
Organism
habn
Halorhabdus sp. BNX81
Pathway
habn00520
Amino sugar and nucleotide sugar metabolism
habn00521
Streptomycin biosynthesis
habn00523
Polyketide sugar unit biosynthesis
habn00525
Acarbose and validamycin biosynthesis
habn01100
Metabolic pathways
habn01110
Biosynthesis of secondary metabolites
habn01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
habn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
HBNXHr_0470 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
HBNXHr_0470 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
HBNXHr_0470 (rfbB)
00525 Acarbose and validamycin biosynthesis
HBNXHr_0470 (rfbB)
Enzymes [BR:
habn01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.35 UDP-glucuronate decarboxylase
HBNXHr_0470 (rfbB)
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Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
adh_short
NAD_binding_10
NmrA
KR
Hydrolase_4
Motif
Other DBs
NCBI-ProteinID:
WEL20545
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Position
complement(484657..485622)
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AA seq
321 aa
AA seq
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MARIVVTGGAGFLGSHLCESLLKDGHEVIAMDNLVSGRTENLDGFFHHDRFTFYEHDVTE
FVHVTGNVDWVCHLASLASPVFYQDHPIKTLKVGALGTHKTLGLAKEKDAKYLFTSTSEV
YGDPEVNPQPEDYRGNVDPYGPRSCYDESKRYAESLIRSYRDQHDLDVRVARVFNTYGPR
MRLDDGRVVPTFLRQALESEPLTVHGDGSQTRSFCYVSDLIAGLRALMDADVQTPINIGN
PDERTIQDLAEVVIDVTDSDSDIVYEGRPEQDPDIRKPDLSKAREHLDWEPSIPLREGIE
RTKVDIAKKSHQRDQQDEICK
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggctaggattgtcgttaccggcggggcgggctttctcggttcgcatctgtgtgaatca
ctactcaaagacggtcacgaagtcatcgcgatggataacctggtgagcggtcgaacggag
aatctggacgggtttttccatcatgatcgatttacgttctatgaacacgacgtaaccgag
ttcgtccacgtgacgggtaacgttgactgggtctgtcatctagcgagcctcgcctcgccg
gtgttctaccaggaccatccaatcaagacactaaaggtcggtgcgctcggcacacacaag
accctcggactggcgaaagaaaaggacgcaaagtacctgtttacctctactagcgaagtg
tacggcgatccggaagtcaatccccagcccgaagactaccgcggaaacgtcgatccgtac
ggcccgcgatcctgttacgacgaatcgaaacgctacgcagagtcgctgattcggtcctat
cgcgaccaacacgatcttgacgtccgtgtcgcgcgggttttcaatacatatggtccccgg
atgcgactcgacgacgggcgtgtcgtgccgacctttctccggcaagcactggagagcgaa
ccgctgaccgttcacggtgacgggagtcaaacgcggagtttctgctacgtttccgacctc
atcgcagggcttcgggcgttgatggatgcggacgtacaaacaccgatcaatatcgggaat
cccgacgaacggacgatccaagacttagcggaggtcgtcatcgatgtgaccgacagcgat
agcgatattgtctacgaagggcgtccagaacaggacccagacatccggaagcccgatctc
tcgaaagcacgtgagcatcttgactgggaaccgtcgattccgctccgtgaagggatcgaa
cggacgaaagtagatattgcaaagaagtcgcatcagagagaccaacaagacgaaatttgc
aaatag
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