Halorhabdus sp. BNX81: HBNXHr_0672
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Entry
HBNXHr_0672 CDS
T09448
Symbol
fdfT
Name
(GenBank) Phytoene/squalene synthetase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
habn
Halorhabdus sp. BNX81
Pathway
habn00100
Steroid biosynthesis
habn00909
Sesquiterpenoid and triterpenoid biosynthesis
habn01100
Metabolic pathways
habn01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
habn00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
HBNXHr_0672 (fdfT)
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
HBNXHr_0672 (fdfT)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
habn01006
]
HBNXHr_0672 (fdfT)
Enzymes [BR:
habn01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
HBNXHr_0672 (fdfT)
Prenyltransferases [BR:
habn01006
]
Terpene biosynthesis
Squalene/phytoene synthase
HBNXHr_0672 (fdfT)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
Arg_decarbox_C
Motif
Other DBs
NCBI-ProteinID:
WEL20745
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All DBs
Position
704128..705171
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AA seq
347 aa
AA seq
DB search
MDSGPPPDLEWCYEAVQGVSRTFALTVEALDEPMASQIGLGYLLCRVADTVEDAGHIPPD
EQVSLLATYDAALDPDSPETMVDFRAAVDPWLPEPERSADWTVVARAPTVWTTFADQPMD
VQAAIVPPVREMVDGMADFLSRHADTGGLRLSDYAELDRYCHYAAGTVGTLITNLLTRDG
VSPDRTEALYDTAGSFARLLQLVNVAKDVHADFEEENNVYLPATWLAAEGVDQEHVLAER
NRDSVARVVERTATRARSFLDDAQSYLETMPLSHGNTLAAWSVPYLLSVGTLRELENRPG
DALTESGVKVDREEVFAVMAVASDTDHEKLGDLRSSIAREPYHLVVE
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggattccggaccaccccctgaccttgagtggtgttacgaggctgtacagggggtctct
cgtacgtttgcgctgaccgtcgaggcactcgacgagccgatggcatcccagatcgggctc
gggtatctgctctgtcgcgtcgccgataccgtcgaagatgccggccatatcccgcctgat
gagcaggtgtcgctgctcgccacgtacgatgccgcgctcgatcccgacagccctgaaacg
atggtcgatttcagggccgctgtcgatccgtggctcccggaaccggaacgctcggcggac
tggacggtcgtcgcgcgcgcaccgacggtgtggaccacgttcgccgatcaaccgatggat
gtccaggcggcgatcgtcccgcccgtcagggagatggtcgacggaatggcggattttctc
tctcgacatgccgacaccggcgggctccgactttcggactacgcggaactcgatcggtac
tgtcactacgccgccgggactgtcgggacccttatcacaaaccttctcacacgcgatggg
gtctcacctgaccggaccgaagcgctgtacgacactgctggatcgttcgctcggctcctc
caactcgtcaacgtcgccaaggacgtccacgcggacttcgaggaggagaacaacgtctac
ttgccggcgacgtggctggccgcggagggcgtcgaccaggaacacgtccttgcagagcgc
aaccgcgattcggttgcccgggtggtcgaacgcacggccacgcgcgcccgctcgtttctg
gatgacgcccagtcctatctcgaaacgatgccgctttctcacggtaatacgctcgccgcc
tggtcggtcccgtacctgctgagcgtcgggacgctccgggaactcgaaaaccgaccgggc
gacgcgcttaccgaatcgggcgtcaaagtcgatcgcgaggaggtattcgccgtaatggcc
gttgcgagcgacaccgaccatgaaaaactcggtgacctccgttcctcgatcgcgcgggaa
ccatatcatctcgtcgtcgagtga
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