Halorhabdus sp. BNX81: HBNXHr_0807
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Entry
HBNXHr_0807 CDS
T09448
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit A'
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
habn
Halorhabdus sp. BNX81
Pathway
habn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
habn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HBNXHr_0807 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
habn03021
]
HBNXHr_0807 (rpoA)
Enzymes [BR:
habn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HBNXHr_0807 (rpoA)
Transcription machinery [BR:
habn03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
HBNXHr_0807 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_5
DnaJ-X
Motif
Other DBs
NCBI-ProteinID:
WEL20878
LinkDB
All DBs
Position
829259..832300
Genome browser
AA seq
1013 aa
AA seq
DB search
MSTGQSPKSIGRLSFGLMNPEEYRDMSATKVITADTYDDDGFPIDMGLMDPRLGVIDPGL
ECKTCGKHSGSCNGHFGHIELAAPVIHVGFSKLIRRLLRGTCRECSRLTAVDGSKYTDGD
GNVDLEAASAAAEDKKREFKEELRRARELSNDPSDVLKSAIRQARSASRCPHCGEKQFDV
KHEKPTTYYEIIEVPHAELAERLSMAMDPPEGEPVTPDELEEATDGGFDAGRIRELLSDT
YRPDRNDIPALQEIGSALHRFNDLEEHLGDELDIESPSSFLLEEDMDKLMPSDIRDWFEE
IPDDDLEAIGVNPETSRPEWMILTVLPVPPVTARPSITLDNGQRSEDDLTHKLVDIIRIN
QRFMENREAGAPQLIIEDLWELLQYHVTTFMDNEISGTPPARHRSGRPLKTLSQRLKGKE
GRFRGSLSGKRVNFSARTVISPDPTLSLNEVGVPDRVASEMTQTMNVNERNLAEARQYVS
NGPEAHPGANYVRRPDGRRLKVTEKNCEELAEKVEPGWEVARHLLDGDIVIFNRQPSLHR
MSIMAHEVVVMPYKTFRLNTVVCPPYNADFDGDEMNMHALQNEEARAEARVLMRVQEQML
SPRFGENIIGAIQDHITSVYLLTHQNPHFNETQALDLLRATNVDELPEPDGEEDGRAYWT
GRSIFSELLPDDLDLEFTSEAGDDVVIEDGQLLEGTIDDSAVGAFGGEIVDTIAKVYDKT
RARIFINEVSTLAVRTIMHFGFSIGIDDESIPPAAQEQVEEAIGSAYDRVQELIETYEQG
DLESLPGRTVDETLEMKIMQTLGQARDSAGDIAEDHFAEDNPAVVMADSGARGSMLNLTQ
MAGCVGQQAVRGERINRGYEDRTLSHFEENDLSAEAHGFVEHSYREGLGPKEFFFHAMGG
REGLVDTAVRTSKSGYLQRRLINALSELETQYDGTVRDTSDTVVQFEFGEDGTSPVDVSS
NEDFDIDVEAITERIVEAEFDDESEKATFLEREASPTNLSEHADEWWHAEAGD
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atgagcacaggacaatcacccaagtcgatcgggcgtctcagcttcgggctgatgaacccc
gaggagtaccgcgatatgagtgccacgaaggtcatcacggccgacacctacgacgacgac
ggcttccccatcgacatggggctgatggacccgcgactcggcgtgatcgaccccggcctg
gagtgtaagacctgtggcaaacactcgggatcgtgtaacggccacttcggccatatcgaa
ctcgccgctcccgtcatccacgtcggcttctcgaagctcattcgccgattgctgcgcgga
acctgtcgggaatgctcccggctgacggccgtcgacggctcgaagtacactgatggcgac
ggcaacgtcgatctcgaagcagcttcggccgctgccgaggacaagaaacgcgagttcaag
gaggaactccggcgggcgcgagaactctcgaacgacccttcggacgtcctcaagtcggcg
atccggcaggcccgctcggccagccggtgtccccactgcggcgaaaagcaattcgacgtc
aaacacgagaaaccgacgacgtactacgagatcatcgaggtcccccacgccgagctcgcc
gagcggctcagcatggcgatggacccgccggaaggtgagccagtcacgcccgacgaactc
gaagaggcgactgacggtgggttcgacgccggtcggatccgggaactgctctcggacacc
taccgcccggaccgcaacgacatccccgcgctccaggagatcggcagcgcgctccatcgg
ttcaacgacctcgaggagcatctcggcgacgagctcgacatcgagagtccgtcgtcgttc
ctcctcgaggaggacatggacaagctgatgcccagcgacatccgggactggttcgaggag
atcccggacgacgacctcgaggcgatcggggtcaaccccgaaacctcgcggccggagtgg
atgatcctcaccgtcctgccggtgccgccggtgacggcccgtccctcgatcacgttggac
aacggccagcggagcgaggacgacctcacccacaagctggtggacatcatccggatcaac
cagcggttcatggagaaccgcgaggccggcgcgccccagctgatcatcgaggacctctgg
gaactgctgcagtaccacgtcaccacgttcatggacaacgagatcagtgggacgccgccg
gcgcgacaccgctcggggcggccgctgaagaccctctcccagcgactgaagggcaaggaa
ggacgcttccgtggcagtctctccgggaagcgcgtgaacttctcggcgcggaccgtcatc
tcgccggacccgaccctgagcctcaacgaggtcggggtgcccgaccgggtcgcaagcgag
atgacccagacgatgaacgtcaacgagcgcaacctcgcggaggcccgccagtacgtctcc
aacgggcccgaagcgcatccgggtgcgaactacgtccgccggccggacggtcggcggctc
aaggtgaccgagaagaactgcgaggagctcgccgagaaggtcgagccgggctgggaagtg
gctcgccacctgctcgacggcgacatcgtgatcttcaaccgccagccgagtctccaccgg
atgtcaatcatggcccacgaggtcgtggtgatgccctacaagacgttccggctgaacacc
gtcgtctgtccgccgtacaacgccgacttcgacggcgacgagatgaacatgcacgccctc
cagaacgaggaggcccgtgccgaggctcgcgtcctcatgcgcgtccaggaacagatgctc
tcgccgcgcttcggcgagaacatcatcggggcgatccaggaccacatcacgtcggtgtac
ctgctgacccaccagaacccccacttcaacgagacccaggccctggacctcctgcgggcg
acgaacgtcgacgagttgcccgaacctgatggagaggaagatggccgggcctactggacg
ggtcggtcgatcttctcggaactgttgccggacgacctcgacctcgaattcacgagcgag
gccggcgacgacgtcgtcatcgaggacggccagttgctcgaagggacgatcgacgacagc
gcagtcggggccttcggcggcgagatcgtcgacacgatcgcgaaggtctacgacaagacg
cgggcgcggatcttcatcaatgaggtctcgacgctcgcggtccggacgatcatgcacttc
gggttctcgatcggcatcgacgacgagtcgatcccgccggcagcccaggagcaggtcgag
gaggcaatcggcagcgcctacgaccgcgtccaggaactcatcgagacctacgaacagggc
gatctcgaatcgctcccgggtcggacggtcgacgagaccctggagatgaagatcatgcag
acgctcggccaggcccgtgacagcgcgggtgacatcgccgaggaccacttcgccgaggac
aacccggcagtggtgatggccgactccggggcgcgtgggtcgatgctgaacctgacccag
atggccgggtgtgtcggccagcaggcagtccgcggcgagcggatcaaccgtggctacgag
gaccgcacgctcagccacttcgaagagaacgacctctcggcggaggcccacggcttcgtc
gagcactcctatcgtgagggcctcggcccgaaggagttcttcttccacgcgatgggtggc
cgcgagggcctggtcgacacggcagtccggacctccaagtccgggtacctccagcgtcgg
ctgatcaacgccctctccgaactggaaactcagtacgacggcaccgtccgggacaccagc
gacaccgtcgtccagttcgagttcggcgaggacggcacctcgccggtggacgtctcttcg
aacgaggacttcgacatcgacgtcgaggcgatcaccgagcggatcgtcgaggccgagttc
gacgatgaaagcgagaaggcgacgttcctcgagcgcgaggcgagtccgaccaacctctcg
gaacacgcggacgagtggtggcacgcggaggccggagactga
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