Halorhabdus sp. BNX81: HBNXHr_1197
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Entry
HBNXHr_1197 CDS
T09448
Symbol
psmR
Name
(GenBank) ATP-dependent 26S proteasome regulatory subunit
KO
K03420
proteasome regulatory subunit
Organism
habn
Halorhabdus sp. BNX81
Pathway
habn03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
habn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
HBNXHr_1197 (psmR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
habn03051
]
HBNXHr_1197 (psmR)
Proteasome [BR:
habn03051
]
Prokaryotic proteasome
Archaeal regulatory particles
HBNXHr_1197 (psmR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_2
AAA_16
RuvB_N
AAA_22
AAA_5
AAA_17
Prot_ATP_ID_OB_C
GrpE
NPHP3_N
TIP49
AAA_14
AAA_33
Mg_chelatase
NACHT
Sigma54_activat
AAA_28
nSTAND3
DUF815
DUF2334
AAA_3
IstB_IS21
PhyR_sigma2
bZIP_1
AAA_7
ATP-synt_ab
CPT
RNA_helicase
DUF4438
NB-ARC
ATPase
Torsin
TsaE
Sigma54_activ_2
AAA_30
Parvo_NS1
Takusan
AAA_11
ABC_tran
AAA_24
AAA_18
DUF724
Cep57_CLD_2
Fungal_TACC
COG4_N
ORC-CDC6-like
ATG14
NTPase_1
COG6_N
APG6_N
Motif
Other DBs
NCBI-ProteinID:
WEL21262
LinkDB
All DBs
Position
1204754..1205953
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AA seq
399 aa
AA seq
DB search
MDDVDQPYDDDVSKQEKIEALEEQLDVLESQNEEMRDELLDANAENNKYKQKLERLTHEN
KKLKQSPLFVATVQELTEDGVVIKQHGNNQEALTEVTEEMREDIEPDDRVAVNNSLSIVK
TLEDETDVRARVMQVDQSPDVNYTDIGGLDDQVSEVRETVEMPLKSPEMFDEVGIDPPSG
VLLHGPPGTGKTMLAKAVANQTDATFIKMAGSELVHKFIGEGAKLVRDLFELARQHEPSV
LFIDEIDAIAAKRTDSKTSGDAEVQRTMMQLLSEMDGFDERGDIRIIAATNRFDMLDRAI
LRPGRFDRLIEVPKPDETGREQIFKIHTRGMNLAETVDFAAIAAEATDASGAEIKAICTE
AGMFAIRDDRTEVTEADFRDAWEKIQAEENDEEVSKTFA
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
gtggacgacgtcgaccagccgtacgacgacgacgtgtccaaacaggagaaaatcgaggcg
ttagaggaacagctcgacgttttggagtcccaaaacgaggagatgcgtgacgagttgctc
gacgccaacgccgagaacaacaagtacaagcagaaactcgagcggctgacccacgagaac
aagaaactcaagcagtcgccgctgttcgtggccacggtccaggaactcactgaggacggc
gtcgtgatcaagcagcacggcaacaatcaggaggccctgacagaggtcaccgaggagatg
cgcgaggacatcgaacccgacgaccgcgtcgccgtcaacaactcgctgtcgatcgtcaag
acgctggaggacgagactgacgttcgggcccgcgtgatgcaggtcgaccagagcccggac
gtcaattacacggatatcggcggactcgacgatcaggtttcggaagtgcgtgaaaccgtc
gagatgccgctgaaaagccccgagatgttcgacgaggtcgggatcgacccgccgagcggc
gtcctgctgcacggtccgccggggacgggcaagacgatgctcgccaaagccgtcgccaac
cagaccgacgccaccttcatcaagatggccggctccgagctggtccacaagttcatcggc
gagggcgcgaagctcgttcgtgatctgttcgaactcgcccgccagcacgaaccatcggtg
ctgttcatcgacgaaatcgacgcgatcgccgccaagcggacggactcaaagaccagcggg
gacgccgaggtccagcggacgatgatgcaacttctttcggagatggacggcttcgacgag
cgtggcgacatccggatcatcgccgcgaccaaccgctttgacatgctcgaccgggcgatc
ctccggcccggccgcttcgaccgcctcatcgaagtgcccaaacccgacgagaccggccgc
gaacagatcttcaagatccacacgcgtggcatgaacctcgccgagactgtcgacttcgcg
gcgattgcggccgaagcgaccgacgccagcggggccgagatcaaggccatctgtaccgag
gccgggatgttcgcgatccgcgacgaccggaccgaagtcaccgaggccgacttccgggac
gcctgggagaagatccaggccgaggagaacgacgaggaagtgtcgaagaccttcgcctga
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integrated database retrieval system
