Halorhabdus sp. BNX81: HBNXHr_1242
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Entry
HBNXHr_1242 CDS
T09448
Symbol
cafA
Name
(GenBank) Ribonuclease G and E
KO
K22469
ribonuclease FAU-1 [EC:3.1.26.-]
Organism
habn
Halorhabdus sp. BNX81
Brite
KEGG Orthology (KO) [BR:
habn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
habn03009
]
HBNXHr_1242 (cafA)
Ribosome biogenesis [BR:
habn03009
]
Prokaryotic type
rRNA processing factors
HBNXHr_1242 (cafA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF402
S1
Motif
Other DBs
NCBI-ProteinID:
WEL21307
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All DBs
Position
complement(1254526..1255953)
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AA seq
475 aa
AA seq
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MATRRSEFPDSMTDGESVTVRVRGIYATALTERLSAADGVTVVQASPPIQNRFETTFADE
PADVRIETDGQRRGISIVGTQLGVERVRESLDVAIDTLGWADPPSQGAIFDGVVTETLGS
GAVVDLGEREGFLPFHATAAHVETDDLLRVQVAEPAAPWSDDRPALETTLSVRGDMATLV
REEPTDAAGPDLLDVLSVDVPDGWRVSWGRDADDADFDALEASLDGLIDRAVEIDDALTA
HDERTTTGRIVEGRGTQWLFFGRESRFALDDNRRAVTPTMPGHHRIKAGDERASAAVDFV
EELAPDLDGTFPFDVVTRQFGPQVGDRVSITHGKPDGRTVSLGRGEVTERDPAGTIRVER
EMSPGGTYDALGTKRRAGDVAVTKFTEGKWWYPTVYRGEDGQKRGTYVNVCTPVEVFPGE
VQYVDLHVDVVKHRDGTVERVDDDELDAAVGAGNVPEALAEKAREVASAVESALS
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggcgacccgtcgatcggagttccccgatagtatgaccgacggagagtcagtcaccgta
cgagtacgcggtatctacgcgacagcacttaccgaacgcctgagcgcggcggacggtgtc
accgtcgtccaggcatcccctcccattcagaaccgcttcgagacgacgttcgccgacgaa
ccggccgacgtgcggatcgaaaccgacggccagcgacgggggatcagtatcgtcggaacg
caactcggcgtcgagcgcgttcgtgagagccttgatgtggcgatcgacacgctcggctgg
gcagatccgccgtcccagggcgcgatcttcgatggtgtcgtcaccgagacgctggggagc
ggagccgtcgtcgatctgggcgagcgcgaggggtttctccccttccacgcgaccgctgca
cacgtcgaaaccgacgacttgctccgggtgcaggtcgccgaaccggcggccccctggagc
gacgaccgccccgcactcgagacgacgctatcggttcgtggcgacatggcgacactggtc
cgcgaggagccgacggacgcggcgggcccggacttgctcgacgtcctctccgtcgacgtg
cccgacggctggcgggtctcctggggtcgggacgccgacgacgccgacttcgacgcgctc
gaagcgagcctcgatggattgatcgatcgagccgtcgaaatcgacgacgcactgacggcc
cacgacgaacgcacgacgaccggtcggatcgtcgagggtcgtggaacgcaatggctgttt
ttcggccgggaatcacgtttcgcgctcgacgataatcgccgggcggtgacgccgacgatg
ccgggccatcaccgcatcaaggcgggcgacgagcgagcgagcgccgccgtggacttcgtc
gaggaactcgccccggacctcgatggaacgttcccgttcgacgtcgtgacccgacagttc
ggcccgcaagtgggtgatcgtgtctccataactcacggcaagccggacggtcggacagtc
agtctcgggcgcggcgaggtgaccgaacgcgacccggcggggaccatccgcgtcgagcgc
gagatgtcgcccggtgggacctacgacgcgctgggcacgaagcgccgggcgggcgatgtc
gccgtcacgaagttcaccgaagggaagtggtggtatccgacagtctaccggggcgaagac
gggcaaaagcgcgggacgtacgtcaacgtctgtacgccagtcgaggtgttccccggggag
gtgcagtacgtcgatctccacgtcgacgtggtcaaacacagagacgggacggtcgagcgg
gtggacgacgacgaactcgacgcggctgttggggcaggcaacgtccccgaggcactcgcc
gagaaggcccgcgaggttgcgagtgcggtcgagagcgcgctgtcgtga
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